WormBase Tree Display for Gene: WBGene00015497

WBGene00015497 Evidence: Paper_evidence: WBPaper00003754
  SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 2
    Name: CGC_name: nhr-76 Person_evidence: WBPerson573
      Sequence_name: C05G6.1
      Molecular_name: C05G6.1
        C05G6.1.1
        CE37476
      Other_name: CELE_C05G6.1 Accession_evidence: NDB BX284604
      Public_name: nhr-76
    DB_info: Database: AceView gene 4B385
        WormQTL gene WBGene00015497
        WormFlux gene WBGene00015497
        NDB locus_tag CELE_C05G6.1
        Panther gene CAEEL|WormBase=WBGene00015497|UniProtKB=Q65CM0
          family PTHR24083
        NCBI gene 182276
        RefSeq protein NM_067560.6
        SwissProt UniProtAcc Q65CM0
        TREEFAM TREEFAM_ID TF317760
        UniProt_GCRP UniProtAcc Q65CM0
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 30 Nov 2004 16:48:19 WBPerson2970 Event: Acquires_merge: WBGene00003666
      Acquires_merge: WBGene00003666
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Laboratory: PY
    Allele: WBVar00881781
      WBVar00881782
      WBVar00881783
      WBVar00881784
      WBVar00881785
      WBVar00881786
      WBVar00249703
      WBVar00881787
      WBVar00881788
      WBVar01607967
      WBVar00881789
      WBVar01607968
      WBVar00881790
      WBVar01607969
      WBVar00881791
      WBVar00881792
      WBVar01607970
      WBVar01607971
      WBVar00881793
      WBVar00881794
      WBVar02030836
      WBVar01607972
      WBVar01607973
      WBVar00881795
      WBVar01607974
      WBVar00881796
      WBVar01607975
      WBVar00881797
      WBVar01607976
      WBVar00881798
      WBVar00881799
      WBVar01607977
      WBVar01499166
      WBVar00881800
      WBVar01607978
      WBVar00881801
      WBVar01607979
      WBVar01607980
      WBVar00881802
      WBVar01607981
      WBVar01647067
      WBVar00881803
      WBVar01647068
      WBVar01607982
      WBVar00881804
      WBVar01647069
      WBVar00881805
      WBVar01607983
      WBVar00881806
      WBVar01647070
      WBVar01607984
      WBVar01647071
      WBVar01607985
      WBVar00881807
      WBVar00881808
      WBVar01647072
      WBVar01607986
      WBVar02078837
      WBVar01579558
      WBVar01607987
      WBVar00881809
      WBVar01647073
      WBVar00881810
      WBVar00881811
      WBVar00881812
      WBVar00881813
      WBVar01828054
      WBVar00881814
      WBVar00881815
      WBVar00881816
      WBVar02067673
      WBVar02080351
      WBVar02048970
      WBVar02078679
      WBVar00313220
      WBVar01996183
      WBVar01996184
      WBVar01996185
      WBVar01996186
      WBVar02133213
      WBVar01996187
      WBVar01996188
      WBVar01996189
      WBVar02045829
      WBVar02045830
      WBVar02045831
      WBVar02045832
      WBVar02045833
      WBVar01893730
      WBVar01984456
      WBVar01984457
      WBVar01910745
      WBVar01984458
      WBVar01984459
      WBVar01984460
      WBVar01450179
      WBVar01450180
      WBVar01450181
      WBVar01450182
      WBVar01450183
      WBVar01499633
      WBVar01450184
      WBVar01821114
      WBVar02111340
      WBVar00297367
      WBVar01818188
      WBVar01818189
      WBVar01833196
      WBVar01818190
      WBVar01818191
      WBVar01825561
      WBVar02080446
      WBVar01818192
      WBVar01818193
      WBVar01825562
      WBVar01818194
      WBVar01818195
      WBVar01818196
      WBVar01481084
      WBVar01481085
      WBVar00881758
      WBVar00881759
      WBVar00881760
      WBVar00881761
      WBVar00881762
      WBVar00881763
      WBVar01499498
      WBVar00881764
      WBVar01499499
      WBVar00881765
      WBVar00881766
      WBVar00415766
      WBVar00881767
      WBVar00415767
      WBVar00881768
      WBVar00881769
      WBVar00415768
      WBVar00415769
      WBVar00881770
      WBVar00415770
      WBVar00881771
      WBVar00415771
      WBVar00881772
      WBVar00415772
      WBVar00881773
      WBVar00415773
      WBVar00881774
      WBVar00415774
      WBVar00881775
      WBVar00415775
      WBVar00881776
      WBVar00415776
      WBVar00881777
      WBVar00415777
      WBVar00881778
      WBVar00415778
      WBVar00881779
      WBVar00881780
    RNASeq_FPKM (74)
    GO_annotation (20)
    Ortholog (34)
    Paralog (250)
    Structured_description: Automated_description: Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Involved in positive regulation of fatty acid beta-oxidation by octopamine signaling pathway; positive regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway; and positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in several structures, including body wall musculature; excretory gland cell; intestine; pharynx; and vulval muscle. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C05G6.1
    Corresponding_CDS_history: C05G6.1:wp102
      C05G6.1:wp131
    Corresponding_transcript: C05G6.1.1
    Other_sequence: GO250325.1
      CJC14094_1
    Associated_feature (15)
    Gene_product_binds (288)
    Transcription_factor: WBTranscriptionFactor000610
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr1183
      Expr11341
      Expr1015484
      Expr1036630
      Expr1143885
      Expr1200056
      Expr2014227
      Expr2032468
    Drives_construct: WBCnstr00010135
      WBCnstr00018784
      WBCnstr00028801
    Construct_product: WBCnstr00010135
      WBCnstr00016707
      WBCnstr00028801
    Microarray_results (24)
    Expression_cluster (134)
    Interaction (36)
  Map_info: Map: IV Position: -23.7312 Error: 0.06052
    Positive: Positive_clone: C05G6 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4589
        5641
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00028802
    WBPaper00044293
    WBPaper00051774
    WBPaper00061738
    WBPaper00062388
    WBPaper00064415
    WBPaper00064719
    WBPaper00065847
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene