WormBase Tree Display for Gene: WBGene00015559
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| WBGene00015559 | SMap | S_parent | Sequence | C06G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npr-17 | Person_evidence | WBPerson10811 | |||||
| WBPerson3043 | |||||||||
| WBPerson42 | |||||||||
| Sequence_name | C06G4.5 | ||||||||
| Molecular_name | C06G4.5 | ||||||||
| C06G4.5.1 | |||||||||
| CE38997 | |||||||||
| Other_name | CELE_C06G4.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | npr-17 | ||||||||
| DB_info | Database | AceView | gene | 3J80 | |||||
| WormQTL | gene | WBGene00015559 | |||||||
| WormFlux | gene | WBGene00015559 | |||||||
| NDB | locus_tag | CELE_C06G4.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015559|UniProtKB=P34311 | |||||||
| family | PTHR24229 | ||||||||
| NCBI | gene | 176124 | |||||||
| RefSeq | protein | NM_066342.5 | |||||||
| SwissProt | UniProtAcc | P34311 | |||||||
| TREEFAM | TREEFAM_ID | TF334200 | |||||||
| UniProt_GCRP | UniProtAcc | P34311 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 Dec 2009 11:00:02 | WBPerson2970 | Name_change | CGC_name | npr-17 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (48) | |||||||||
| Strain | WBStrain00051832 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (27) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity and peptide binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in neuron projection. Expressed in ganglia and head neurons. Is an ortholog of human SSTR4 (somatostatin receptor 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06G4.5 | |||||||
| Corresponding_CDS_history | C06G4.5:wp147 | ||||||||
| Corresponding_transcript | C06G4.5.1 | ||||||||
| Other_sequence | EX542244.1 | ||||||||
| ACC16910_1 | |||||||||
| JI217757.1 | |||||||||
| EX537424.1 | |||||||||
| Dviv_isotig25876 | |||||||||
| Oden_isotig28702 | |||||||||
| ACC27634_1 | |||||||||
| EX547541.1 | |||||||||
| Acan_isotig10554 | |||||||||
| JI219148.1 | |||||||||
| Associated_feature | WBsf667121 | ||||||||
| WBsf993213 | |||||||||
| WBsf993214 | |||||||||
| WBsf993215 | |||||||||
| WBsf1015348 | |||||||||
| WBsf227063 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039946 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005483 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12182 | ||||||||
| Expr12994 | |||||||||
| Expr1029002 | |||||||||
| Expr1144019 | |||||||||
| Expr2014402 | |||||||||
| Expr2032643 | |||||||||
| Drives_construct | WBCnstr00020386 | ||||||||
| WBCnstr00028751 | |||||||||
| WBCnstr00038056 | |||||||||
| Construct_product | WBCnstr00028751 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (149) | |||||||||
| Interaction | WBInteraction000279319 | ||||||||
| WBInteraction000290475 | |||||||||
| WBInteraction000380438 | |||||||||
| WBInteraction000392055 | |||||||||
| WBInteraction000435903 | |||||||||
| Map_info | Map | III | Position | -0.450825 | Error | 0.000392 | |||
| Positive | Positive_clone | C06G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (15) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
