WormBase Tree Display for Gene: WBGene00015602

WBGene00015602 SMap: S_parent: Sequence: C08E3
  Identity: Version: 2
    Name: CGC_name: fbxa-158 Person_evidence: WBPerson655
      Sequence_name: C08E3.10
      Molecular_name: C08E3.10a
        C08E3.10a.1
        CE34666
        C08E3.10b
        CE39672
        C08E3.10b.1
      Other_name: CELE_C08E3.10 Accession_evidence: NDB BX284602
      Public_name: fbxa-158
    DB_info: Database: WormQTL gene WBGene00015602
        WormFlux gene WBGene00015602
        NDB locus_tag CELE_C08E3.10
        Panther gene CAEEL|WormBase=WBGene00015602|UniProtKB=G4RXG5
          family PTHR23015
        NCBI gene 182402
        RefSeq protein NM_001047269.3
            NM_001047268.3
        TREEFAM TREEFAM_ID TF321294
        TrEMBL UniProtAcc O17201
            G4RXG5
        UniProt_GCRP UniProtAcc G4RXG5
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 01 Mar 2007 11:55:18 WBPerson2970 Name_change: CGC_name: fbxa-158
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (101)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP2763
    Ortholog (19)
    Paralog (221)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in ALM; PLM; intestine; and sensory neurons based on tiling array; microarray; and RNA-seq studies. Is affected by several genes including daf-16; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including methylmercury hydroxide; methylmercuric chloride; and Tunicamycin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C08E3.10a
      C08E3.10b
    Corresponding_CDS_history: C08E3.10:wp104
      C08E3.10:wp154
    Corresponding_transcript: C08E3.10a.1
      C08E3.10b.1
    Associated_feature: WBsf222706
      WBsf222707
  Experimental_info: RNAi_result: WBRNAi00040088 Inferred_automatically: RNAi_primary
      WBRNAi00028668 Inferred_automatically: RNAi_primary
      WBRNAi00010442 Inferred_automatically: RNAi_primary
      WBRNAi00070122 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017248
      Expr1144154
      Expr2011489
      Expr2029726
    Drives_construct: WBCnstr00028721
    Construct_product: WBCnstr00028721
    Microarray_results (20)
    Expression_cluster (249)
    Interaction: WBInteraction000371228
      WBInteraction000415367
      WBInteraction000567011
  Map_info: Map: II Position: -15.212 Error: 0.011426
    Positive: Positive_clone: C08E3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
    WBPaper00030811
    WBPaper00059442
    WBPaper00061319
    WBPaper00062289
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene