WormBase Tree Display for Gene: WBGene00015639
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| WBGene00015639 | SMap | S_parent | Sequence | C09E7 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | C09E7.5 | ||||||||
| Molecular_name | C09E7.5 | |||||||||
| Other_name | C09E7.d | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | |||||||||
| CELE_C09E7.5 | Accession_evidence | NDB | BX284603 | |||||||
| Public_name | C09E7.5 | |||||||||
| DB_info | Database | AceView | gene | 3H626 | ||||||
| WormQTL | gene | WBGene00015639 | ||||||||
| WormFlux | gene | WBGene00015639 | ||||||||
| NDB | locus_tag | CELE_C09E7.5 | ||||||||
| NCBI | gene | 182451 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 20 Jan 2020 12:17:30 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (38) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Contained_in_operon | CEOP3857 | |||||||||
| CEOP3871 | ||||||||||
| Ortholog (14) | ||||||||||
| Paralog | WBGene00022264 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | ||||||||||
| WBGene00015642 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00020665 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00022265 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00015818 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00022262 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Structured_description | Automated_description | Enriched in ABaraappaa and NSM based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-12; eat-2; and rrf-1 based on RNA-seq and microarray studies. Is affected by four chemicals including multi-walled carbon nanotube; Rifampin; and Sirolimus based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C09E7.5:wp194 | ||||||||
| C09E7.5:wp275 | ||||||||||
| Corresponding_pseudogene | C09E7.5 | |||||||||
| Other_sequence | Oden_isotig21539 | |||||||||
| Experimental_info | Expr_pattern | Expr1012545 | ||||||||
| Expr1144264 | ||||||||||
| Expr2000648 | ||||||||||
| Expr2018872 | ||||||||||
| Drives_construct | WBCnstr00028694 | |||||||||
| Construct_product | WBCnstr00028694 | |||||||||
| Microarray_results (12) | ||||||||||
| Expression_cluster (33) | ||||||||||
| Map_info | Positive | Positive_clone | C09E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | III | -1.07362 | ||||||||
| Reference | WBPaper00027315 | |||||||||
| WBPaper00038491 | ||||||||||
| WBPaper00055090 | ||||||||||
| WBPaper00064325 | ||||||||||
| Method | Gene |
