WormBase Tree Display for Gene: WBGene00015743

WBGene00015743 SMap: S_parent: Sequence: C13F10
  Identity: Version: 2
    Name: CGC_name: soap-1 Person_evidence: WBPerson1963
      Sequence_name: C13F10.4
      Molecular_name: C13F10.4
        C13F10.4.1
        CE08145
      Other_name: CELE_C13F10.4 Accession_evidence: NDB BX284605
      Public_name: soap-1
    DB_info: Database: AceView gene 5H686
        WormQTL gene WBGene00015743
        WormFlux gene WBGene00015743
        NDB locus_tag CELE_C13F10.4
        Panther gene CAEEL|WormBase=WBGene00015743|UniProtKB=O01485
          family PTHR21663
        NCBI gene 179109
        RefSeq protein NM_072427.6
        TREEFAM TREEFAM_ID TF300706
        TrEMBL UniProtAcc O01485
        UniProt_GCRP UniProtAcc O01485
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 May 2014 11:44:19 WBPerson2970 Name_change: CGC_name: soap-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: soap
    Allele (129)
    Strain: WBStrain00001229
      WBStrain00001480
      WBStrain00037397
    RNASeq_FPKM (74)
    GO_annotation: 00024746
      00024747
      00024748
      00024749
      00024750
      00024751
      00024752
    Contained_in_operon: CEOP5144
    Ortholog (50)
    Structured_description: Automated_description: Involved in apical protein localization. Predicted to be located in endocytic vesicle. Is an ortholog of human HEATR5A (HEAT repeat containing 5A) and HEATR5B (HEAT repeat containing 5B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C13F10.4
    Corresponding_transcript: C13F10.4.1
    Other_sequence (30)
    Associated_feature: WBsf233921
  Experimental_info: RNAi_result: WBRNAi00040448 Inferred_automatically: RNAi_primary
      WBRNAi00008385 Inferred_automatically: RNAi_primary
      WBRNAi00024545 Inferred_automatically: RNAi_primary
      WBRNAi00071541 Inferred_automatically: RNAi_primary
      WBRNAi00103186 Inferred_automatically: RNAi_primary
      WBRNAi00071677 Inferred_automatically: RNAi_primary
      WBRNAi00002372 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr5257
      Expr5258
      Expr1016218
      Expr1036735
      Expr1144515
      Expr2015991
      Expr2034226
    Drives_construct: WBCnstr00002121
      WBCnstr00028603
    Construct_product: WBCnstr00016472
      WBCnstr00028603
    Microarray_results (20)
    Expression_cluster (96)
    Interaction (37)
  Map_info: Map: V Position: 0.633074
    Positive: Positive_clone: C13F10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031006
    WBPaper00032078
    WBPaper00038491
    WBPaper00046645
    WBPaper00055090
    WBPaper00064898
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene