WormBase Tree Display for Gene: WBGene00015787
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| WBGene00015787 | SMap | S_parent | Sequence | C15B12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | actl-1 | Paper_evidence | ||||||
| Sequence_name | C15B12.6 | ||||||||
| Molecular_name | C15B12.6a | ||||||||
| C15B12.6a.1 | |||||||||
| CE47363 | |||||||||
| C15B12.6b | |||||||||
| CE50614 | |||||||||
| C15B12.6b.1 | |||||||||
| Other_name | CELE_C15B12.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | actl-1 | ||||||||
| DB_info | Database | AceView | gene | XH110 | |||||
| WormQTL | gene | WBGene00015787 | |||||||
| WormFlux | gene | WBGene00015787 | |||||||
| NDB | locus_tag | CELE_C15B12.6 | |||||||
| NCBI | gene | 182629 | |||||||
| RefSeq | protein | NM_076693.5 | |||||||
| NM_001313387.4 | |||||||||
| SwissProt | UniProtAcc | Q18008 | |||||||
| UniProt_GCRP | UniProtAcc | Q18008 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | actl | ||||||||
| Allele (47) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00059925 | ||||||||
| 00059926 | |||||||||
| 00059927 | |||||||||
| 00059928 | |||||||||
| Contained_in_operon | CEOPX076 | ||||||||
| Ortholog (18) | |||||||||
| Structured_description | Automated_description | Enriched in AVK; DVA; NSM; and sensory neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; hsf-1; and clk-1 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C15B12.6a | |||||||
| C15B12.6b | |||||||||
| Corresponding_CDS_history | C15B12.6:wp133 | ||||||||
| C15B12.6:wp230 | |||||||||
| Corresponding_transcript | C15B12.6a.1 | ||||||||
| C15B12.6b.1 | |||||||||
| Other_sequence | CR04822 | ||||||||
| CRC07934_1 | |||||||||
| Associated_feature | WBsf1005580 | ||||||||
| WBsf1023104 | |||||||||
| WBsf237490 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010780 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040587 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020811 | ||||||||
| Expr1036754 | |||||||||
| Expr1144641 | |||||||||
| Expr2009226 | |||||||||
| Expr2027463 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (66) | |||||||||
| Interaction (182) | |||||||||
| Map_info | Map | X | Position | -2.89125 | |||||
| Positive | Positive_clone | C15B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00050664 | ||||||||
| WBPaper00059609 | |||||||||
| WBPaper00060770 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
