WormBase Tree Display for Gene: WBGene00015794
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| WBGene00015794 | SMap | S_parent | Sequence | C15F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C15F1.1 | |||||||
| Molecular_name | C15F1.1a | ||||||||
| C15F1.1a.1 | |||||||||
| CE52218 | |||||||||
| C15F1.1b | |||||||||
| CE52315 | |||||||||
| C15F1.1b.1 | |||||||||
| Other_name | CELE_C15F1.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C15F1.1 | ||||||||
| DB_info | Database | AceView | gene | 2H279 | |||||
| WormQTL | gene | WBGene00015794 | |||||||
| WormFlux | gene | WBGene00015794 | |||||||
| NDB | locus_tag | CELE_C15F1.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015794|UniProtKB=A0A2C9C2Z6 | |||||||
| family | PTHR15854 | ||||||||
| NCBI | gene | 182638 | |||||||
| RefSeq | protein | NM_001383877.2 | |||||||
| NM_001381484.2 | |||||||||
| TrEMBL | UniProtAcc | A0A2C9C2Z6 | |||||||
| A0A2C9C2Z4 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A2C9C2Z6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (13) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00003104 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008260 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008993 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012143 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012917 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00016196 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044557 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in PLM and hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; RNA-seq; and microarray studies. Is affected by eighteen chemicals including rotenone; D-glucose; and Zidovudine based on RNA-seq and microarray studies. Human THAP4 enables several functions, including heme binding activity; identical protein binding activity; and peroxynitrite isomerase activity. Is predicted to encode a protein with the following domains: THAP4-like, heme-binding beta-barrel domain; Calycin; and Nitrobindin family. Is an ortholog of human THAP4 (THAP domain containing 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C15F1.1a | |||||||
| C15F1.1b | |||||||||
| Corresponding_CDS_history | C15F1.1:wp261 | ||||||||
| Corresponding_transcript | C15F1.1a.1 | ||||||||
| C15F1.1b.1 | |||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf988324 | ||||||||
| WBsf988325 | |||||||||
| WBsf1012471 | |||||||||
| WBsf1012472 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040607 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1014344 | ||||||||
| Expr1036759 | |||||||||
| Expr1144663 | |||||||||
| Expr2000821 | |||||||||
| Expr2019039 | |||||||||
| Drives_construct | WBCnstr00028562 | ||||||||
| Construct_product | WBCnstr00028562 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (182) | |||||||||
| Interaction | WBInteraction000369065 | ||||||||
| WBInteraction000464853 | |||||||||
| WBInteraction000553295 | |||||||||
| Map_info | Positive | Positive_clone | C15F1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.20772 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
