WormBase Tree Display for Gene: WBGene00015821
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| WBGene00015821 | SMap | S_parent | Sequence | C16A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-135 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | C16A11.8 | ||||||||
| Molecular_name | C16A11.8 | ||||||||
| C16A11.8.1 | |||||||||
| CE19358 | |||||||||
| Other_name | CELE_C16A11.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | clec-135 | ||||||||
| DB_info | Database | AceView | gene | 2E548 | |||||
| WormQTL | gene | WBGene00015821 | |||||||
| WormFlux | gene | WBGene00015821 | |||||||
| NDB | locus_tag | CELE_C16A11.8 | |||||||
| NCBI | gene | 173760 | |||||||
| RefSeq | protein | NM_062349.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315532 | |||||||
| TrEMBL | UniProtAcc | O76586 | |||||||
| UniProt_GCRP | UniProtAcc | O76586 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-135 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (118) | |||||||||
| Structured_description | Automated_description | Enriched in neurons based on RNA-seq studies. Is affected by several genes including let-60; eat-2; and tph-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including Alovudine; stavudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C16A11.8 | |||||||
| Corresponding_transcript | C16A11.8.1 | ||||||||
| Other_sequence | CR04117 | ||||||||
| SR00730 | |||||||||
| CRC03727_1 | |||||||||
| CBC00598_1 | |||||||||
| CJC15208_1 | |||||||||
| MH05364 | |||||||||
| JI213343.1 | |||||||||
| Associated_feature | WBsf987553 | ||||||||
| WBsf1012063 | |||||||||
| WBsf222909 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010814 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028941 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040650 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112624 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011516 | ||||||||
| Expr1144703 | |||||||||
| Drives_construct | WBCnstr00028540 | ||||||||
| Construct_product | WBCnstr00028540 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (69) | |||||||||
| Interaction (23) | |||||||||
| Map_info | Map | II | Position | -4.97869 | Error | 0.020096 | |||
| Positive | Positive_clone | C16A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031002 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
