WormBase Tree Display for Gene: WBGene00015938
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| WBGene00015938 | SMap | S_parent | Sequence | H34C03 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | anat-1 | Paper_evidence | WBPaper00040317 | |||||
| Person_evidence | WBPerson260 | ||||||||
| Sequence_name | C17H12.13 | ||||||||
| Molecular_name | C17H12.13a | ||||||||
| C17H12.13a.1 | |||||||||
| CE37201 | |||||||||
| C17H12.13b | |||||||||
| CE19361 | |||||||||
| C17H12.13b.1 | |||||||||
| Other_name | CE37201 | Paper_evidence | WBPaper00040317 | ||||||
| CELE_C17H12.13 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | anat-1 | ||||||||
| DB_info | Database | AceView | gene | 4H543 | |||||
| WormQTL | gene | WBGene00015938 | |||||||
| WormFlux | gene | WBGene00015938 | |||||||
| NDB | locus_tag | CELE_C17H12.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015938|UniProtKB=G5EDH7 | |||||||
| family | PTHR20905 | ||||||||
| NCBI | gene | 177439 | |||||||
| RefSeq | protein | NM_001083193.5 | |||||||
| NM_001083194.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF323871 | |||||||
| TrEMBL | UniProtAcc | G5EDH7 | |||||||
| G4S185 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EDH7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 27 Apr 2012 17:06:28 | WBPerson2970 | Name_change | CGC_name | anat-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | anat | ||||||||
| Allele (94) | |||||||||
| Strain | WBStrain00003553 | ||||||||
| WBStrain00047482 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00009193 | ||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00010884 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00010887 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011042 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011046 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00020390 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00020941 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00020940 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00020058 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | anat-1 encodes a protein containing a C-terminal acetyltransferase domain and a protein kinase A phosphorylation site that is a member of the arylalkylamine N-acetyltransferases (AA-NAT) family, and the Gcn5-related N-acetyltransferases (GNAT) superfamily, of proteins; ANAT-1 shows similarity to enzymes involved in melatonin synthesis from serotonin; adult C. elegans exhibit daily fluctuation in AA-NAT activity that is inhibited by both white and blue light. | Paper_evidence | WBPaper00040317 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 01 May 2012 00:00:00 | ||||||||
| Automated_description | Predicted to enable N-acetyltransferase activity. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C17H12.13a | |||||||
| C17H12.13b | |||||||||
| Corresponding_CDS_history | C17H12.13:wp129 | ||||||||
| C17H12.13:wp165 | |||||||||
| Corresponding_transcript | C17H12.13a.1 | ||||||||
| C17H12.13b.1 | |||||||||
| Other_sequence | CBC04543_1 | ||||||||
| CR01235 | |||||||||
| CRC00885_1 | |||||||||
| CR12465 | |||||||||
| Associated_feature | WBsf646038 | ||||||||
| WBsf646039 | |||||||||
| WBsf660245 | |||||||||
| WBsf716573 | |||||||||
| WBsf996829 | |||||||||
| WBsf228452 | |||||||||
| WBsf228453 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00061735 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040863 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010944 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033615 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5294 | ||||||||
| Expr1023533 | |||||||||
| Expr1036813 | |||||||||
| Expr1144909 | |||||||||
| Expr2009332 | |||||||||
| Expr2027568 | |||||||||
| Drives_construct | WBCnstr00004005 | ||||||||
| WBCnstr00028441 | |||||||||
| Construct_product | WBCnstr00028441 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (134) | |||||||||
| Interaction (48) | |||||||||
| Map_info | Map | IV | Position | 3.23072 | |||||
| Positive | Positive_clone | C17H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030887 | ||||||||
| WBPaper00040317 | |||||||||
| WBPaper00041771 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
