WormBase Tree Display for Gene: WBGene00016032
expand all nodes | collapse all nodes | view schema
| WBGene00016032 | SMap | S_parent | Sequence | C24A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C24A3.1 | |||||||
| Molecular_name | C24A3.1a | ||||||||
| C24A3.1a.1 | |||||||||
| CE53140 | |||||||||
| C24A3.1b | |||||||||
| CE53386 | |||||||||
| C24A3.1c | |||||||||
| CE53439 | |||||||||
| C24A3.1b.1 | |||||||||
| C24A3.1c.1 | |||||||||
| Other_name | CELE_C24A3.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C24A3.1 | ||||||||
| DB_info | Database | AceView | gene | XJ625 | |||||
| WormQTL | gene | WBGene00016032 | |||||||
| WormFlux | gene | WBGene00016032 | |||||||
| NDB | locus_tag | CELE_C24A3.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016032|UniProtKB=Q18126 | |||||||
| family | PTHR35153 | ||||||||
| NCBI | gene | 182826 | |||||||
| RefSeq | protein | NM_001373405.1 | |||||||
| NM_001373404.1 | |||||||||
| NM_001373406.1 | |||||||||
| TrEMBL | UniProtAcc | A0A4V0ILS0 | |||||||
| A0A4V0ILC7 | |||||||||
| A0A4V0IK49 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A4V0IK49 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (95) | |||||||||
| Strain | WBStrain00055369 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Structured_description | Automated_description | Enriched in neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including sek-1; pgl-1; and alg-1 based on tiling array; microarray; and RNA-seq studies. Is affected by five chemicals including Rifampin; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Coiled-coil domain-containing protein 154. Is an ortholog of human CCDC154 (coiled-coil domain containing 154). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C24A3.1a | |||||||
| C24A3.1b | |||||||||
| C24A3.1c | |||||||||
| Corresponding_CDS_history | C24A3.1:wp156 | ||||||||
| C24A3.1:wp271 | |||||||||
| Corresponding_transcript | C24A3.1a.1 | ||||||||
| C24A3.1b.1 | |||||||||
| C24A3.1c.1 | |||||||||
| Other_sequence | BXC01082_1 | ||||||||
| Acan_isotig14690 | |||||||||
| AE03695 | |||||||||
| MC00844 | |||||||||
| Dviv_isotig27316 | |||||||||
| Oden_isotig26488 | |||||||||
| AYC02457_1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011075 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041051 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022786 | ||||||||
| Expr1145089 | |||||||||
| Expr2001030 | |||||||||
| Expr2019248 | |||||||||
| Drives_construct | WBCnstr00028375 | ||||||||
| Construct_product | WBCnstr00028375 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (49) | |||||||||
| SAGE_tag | SAGE:tcaataagat | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:gaaggacttt | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:cccttctttt | Strand | Antisense | |||||||
| SAGE:agaaaggattgcttgca | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:cccttcttttggtgctt | Strand | Antisense | |||||||
| SAGE:gaaaaggctc | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction | WBInteraction000185038 | ||||||||
| Map_info | Positive | Positive_clone | C24A3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 0.506855 | |||||||
| Reference | WBPaper00038491 | ||||||||
| Method | Gene |
