WormBase Tree Display for Gene: WBGene00016091
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| WBGene00016091 | SMap | S_parent | Sequence | C25E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-30 | Person_evidence | WBPerson600 | |||||
| Sequence_name | C25E10.1 | ||||||||
| Molecular_name | C25E10.1 | ||||||||
| C25E10.1.1 | |||||||||
| CE52799 | |||||||||
| Other_name | CELE_C25E10.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-30 | ||||||||
| DB_info | Database | AceView | gene | 5J523 | |||||
| WormQTL | gene | WBGene00016091 | |||||||
| WormFlux | gene | WBGene00016091 | |||||||
| NDB | locus_tag | CELE_C25E10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016091|UniProtKB=Q18155 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 182887 | |||||||
| RefSeq | protein | NM_072942.6 | |||||||
| TrEMBL | UniProtAcc | Q18155 | |||||||
| UniProt_GCRP | UniProtAcc | Q18155 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:11 | WBPerson2970 | Name_change | CGC_name | nhr-30 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00001843 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00060297 | ||||||||
| 00060298 | |||||||||
| 00060299 | |||||||||
| 00121772 | |||||||||
| 00121773 | |||||||||
| 00121774 | |||||||||
| 00121775 | |||||||||
| Ortholog (28) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in head. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C25E10.1 | |||||||
| Corresponding_CDS_history | C25E10.1:wp267 | ||||||||
| Corresponding_transcript | C25E10.1.1 | ||||||||
| Associated_feature | WBsf647044 | ||||||||
| WBsf978759 | |||||||||
| WBsf232202 | |||||||||
| Transcription_factor | WBTranscriptionFactor000589 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00041179 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011158 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1770 | ||||||||
| Expr5335 | |||||||||
| Expr1024504 | |||||||||
| Expr1145210 | |||||||||
| Expr1200327 | |||||||||
| Expr2014179 | |||||||||
| Expr2032420 | |||||||||
| Drives_construct | WBCnstr00002637 | ||||||||
| WBCnstr00028330 | |||||||||
| Construct_product | WBCnstr00016785 | ||||||||
| WBCnstr00017314 | |||||||||
| WBCnstr00028330 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (53) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | V | Position | 1.91391 | Error | 0.000443 | |||
| Positive | Positive_clone | C25E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5342 | |||||||
| 5029 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
