WormBase Tree Display for Gene: WBGene00016118
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| WBGene00016118 | SMap | S_parent | Sequence | C25H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ndub-5 | Person_evidence | WBPerson555 | |||||
| Sequence_name | C25H3.9 | ||||||||
| Molecular_name | C25H3.9 | ||||||||
| C25H3.9.1 | |||||||||
| CE44829 | |||||||||
| Other_name | CELE_C25H3.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | ndub-5 | ||||||||
| DB_info | Database | AceView | gene | 2F980 | |||||
| WormQTL | gene | WBGene00016118 | |||||||
| WormFlux | gene | WBGene00016118 | |||||||
| NDB | locus_tag | CELE_C25H3.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016118|UniProtKB=H2KYV1 | |||||||
| family | PTHR13178 | ||||||||
| NCBI | gene | 173963 | |||||||
| RefSeq | protein | NM_171001.8 | |||||||
| TrEMBL | UniProtAcc | H2KYV1 | |||||||
| UniProt_GCRP | UniProtAcc | H2KYV1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Jan 2023 18:37:21 | WBPerson51134 | Name_change | CGC_name | ndub-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ndub | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01719912 | |||||||||
| WBVar01719913 | |||||||||
| WBVar01498435 | |||||||||
| WBVar01306199 | |||||||||
| WBVar01500128 | |||||||||
| WBVar00733508 | |||||||||
| WBVar00733509 | |||||||||
| WBVar00733510 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00021906 | ||||||||
| 00021907 | |||||||||
| 00021908 | |||||||||
| Contained_in_operon | CEOP2728 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Concise_description | C25H3.9 encodes the C. elegans ortholog of the NDUFB5/SGDH subunit of the mitochondrial NADH dehydrogenase (ubiquinone) complex (complex I). | Paper_evidence | WBPaper00005928 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 07 Nov 2006 00:00:00 | ||||||||
| Automated_description | Predicted to be located in membrane and mitochondrion. Predicted to be part of mitochondrial respiratory chain complex I. Expressed in hypodermis; intestine; and pharynx. Is an ortholog of human NDUFB5 (NADH:ubiquinone oxidoreductase subunit B5). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C25H3.9 | |||||||
| Corresponding_CDS_history | C25H3.9b:wp274 | ||||||||
| Corresponding_transcript | C25H3.9.1 | ||||||||
| Other_sequence (63) | |||||||||
| Associated_feature | WBsf650080 | ||||||||
| WBsf665550 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041233 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr2050 | ||||||||
| Expr1021758 | |||||||||
| Expr1036887 | |||||||||
| Expr1145273 | |||||||||
| Expr2001118 | |||||||||
| Expr2019339 | |||||||||
| Drives_construct | WBCnstr00028313 | ||||||||
| Construct_product | WBCnstr00028313 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (86) | |||||||||
| Interaction (63) | |||||||||
| Map_info | Positive | Positive_clone | C25H3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -0.968326 | |||||||
| Reference | WBPaper00005928 | ||||||||
| WBPaper00031194 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062388 | |||||||||
| Method | Gene |
