WormBase Tree Display for Gene: WBGene00016126
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| WBGene00016126 | SMap | S_parent | Sequence | C26B2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-258 | Person_evidence | WBPerson600 | |||||
| Sequence_name | C26B2.4 | ||||||||
| Molecular_name | C26B2.4 | ||||||||
| C26B2.4.1 | |||||||||
| CE49531 | |||||||||
| Other_name | CELE_C26B2.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | nhr-258 | ||||||||
| DB_info | Database | AceView | gene | 4I809 | |||||
| WormQTL | gene | WBGene00016126 | |||||||
| WormFlux | gene | WBGene00016126 | |||||||
| NDB | locus_tag | CELE_C26B2.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016126|UniProtKB=Q18190 | |||||||
| family | PTHR24086 | ||||||||
| NCBI | gene | 182927 | |||||||
| RefSeq | protein | NM_068947.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315528 | |||||||
| TrEMBL | UniProtAcc | Q18190 | |||||||
| UniProt_GCRP | UniProtAcc | Q18190 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-258 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (221) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in hormone-mediated signaling pathway; regulation of transcription by RNA polymerase II; and tissue development. Predicted to be located in nucleus. Predicted to be part of RNA polymerase II transcription regulator complex. Expressed in neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C26B2.4 | |||||||
| Corresponding_CDS_history | C26B2.4:wp105 | ||||||||
| C26B2.4:wp231 | |||||||||
| C26B2.4:wp241 | |||||||||
| Corresponding_transcript | C26B2.4.1 | ||||||||
| Associated_feature (11) | |||||||||
| Transcription_factor | WBTranscriptionFactor000692 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00041238 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029212 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011198 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7445 | ||||||||
| Expr10129 | |||||||||
| Expr1026791 | |||||||||
| Expr1145277 | |||||||||
| Expr2014150 | |||||||||
| Expr2032393 | |||||||||
| Drives_construct | WBCnstr00012589 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (76) | |||||||||
| Interaction | WBInteraction000346256 | ||||||||
| WBInteraction000387701 | |||||||||
| WBInteraction000453531 | |||||||||
| WBInteraction000462671 | |||||||||
| Map_info | Map | IV | Position | 3.5883 | Error | 0.001634 | |||
| Positive | Positive_clone | C26B2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00063946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
