WormBase Tree Display for Gene: WBGene00016198
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| WBGene00016198 | SMap | S_parent | Sequence | C28H8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C28H8.7 | |||||||
| Molecular_name | C28H8.7 | ||||||||
| C28H8.7.1 | |||||||||
| CE01829 | |||||||||
| Other_name | CELE_C28H8.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C28H8.7 | ||||||||
| DB_info | Database | AceView | gene | 3G974 | |||||
| WormQTL | gene | WBGene00016198 | |||||||
| WormFlux | gene | WBGene00016198 | |||||||
| NDB | locus_tag | CELE_C28H8.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016198|UniProtKB=Q09245 | |||||||
| family | PTHR22989 | ||||||||
| NCBI | gene | 182997 | |||||||
| RefSeq | protein | NM_065877.3 | |||||||
| SwissProt | UniProtAcc | Q09245 | |||||||
| TREEFAM | TREEFAM_ID | TF316021 | |||||||
| UniProt_GCRP | UniProtAcc | Q09245 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00078730 | Caenorhabditis remanei | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| OTIPU.nOt.2.0.1.g09445 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
| Pan_g11517 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Pan_g12032 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Pan_g12033 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Pan_g12817 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Pan_g13685 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Pan_g18559 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Pan_g9728 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| chrIII_pilon.g7819 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (35) | |||||||||
| Structured_description | Automated_description | Enriched in neurons; pharyngeal-intestinal valve; and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including lin-4; lin-14; and clk-1 based on microarray and RNA-seq studies. Is affected by Alovudine; resveratrol; and Atrazine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C28H8.7 | |||||||
| Corresponding_transcript | C28H8.7.1 | ||||||||
| Other_sequence | Dviv_isotig30795 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00005301 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041434 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007064 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041433 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029306 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011315 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017440 | ||||||||
| Expr1145463 | |||||||||
| Expr2001208 | |||||||||
| Expr2019430 | |||||||||
| Drives_construct | WBCnstr00028252 | ||||||||
| Construct_product | WBCnstr00028252 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (34) | |||||||||
| Interaction | WBInteraction000180188 | ||||||||
| WBInteraction000209551 | |||||||||
| WBInteraction000230847 | |||||||||
| WBInteraction000267855 | |||||||||
| WBInteraction000274162 | |||||||||
| WBInteraction000343707 | |||||||||
| WBInteraction000367893 | |||||||||
| WBInteraction000446707 | |||||||||
| Map_info | Positive | Positive_clone | C28H8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.43677 | |||||||
| Method | Gene |
