WormBase Tree Display for Gene: WBGene00016215
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| WBGene00016215 | SMap | S_parent | Sequence | C29F5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | glb-10 | Paper_evidence | WBPaper00031066 | |||||
| Person_evidence | WBPerson1540 | ||||||||
| Sequence_name | C29F5.7 | ||||||||
| Molecular_name | C29F5.7 | ||||||||
| C29F5.7.1 | |||||||||
| CE02514 | |||||||||
| Other_name | CELE_C29F5.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | glb-10 | ||||||||
| DB_info | Database | AceView | gene | 2G596 | |||||
| WormQTL | gene | WBGene00016215 | |||||||
| WormFlux | gene | WBGene00016215 | |||||||
| NDB | locus_tag | CELE_C29F5.7 | |||||||
| NCBI | gene | 183015 | |||||||
| RefSeq | protein | NM_062867.4 | |||||||
| TrEMBL | UniProtAcc | Q18311 | |||||||
| UniProt_GCRP | UniProtAcc | Q18311 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Oct 2007 15:16:41 | WBPerson2970 | Name_change | CGC_name | glb-10 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glb | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00060892 | ||||||||
| 00060893 | |||||||||
| 00060894 | |||||||||
| 00121888 | |||||||||
| 00121889 | |||||||||
| Ortholog (26) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Concise_description | glb-10 encodes a globin; glb-10 is expressed in pharynx, intestine, vulval muscle, and many neurons, with at least some subcellular localization to synapses. | Paper_evidence | WBPaper00025067 | |||||
| WBPaper00026667 | |||||||||
| WBPaper00031066 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 24 May 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable heme binding activity; oxygen binding activity; and oxygen carrier activity. Predicted to be involved in oxygen transport. Located in plasma membrane. Expressed in several structures, including excretory cell; gonad; neurons; non-striated muscle; and somatic nervous system. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C29F5.7 | |||||||
| Corresponding_transcript | C29F5.7.1 | ||||||||
| Other_sequence | Dviv_isotig24298 | ||||||||
| Acan_isotig11118 | |||||||||
| EY468085.1 | |||||||||
| Oden_isotig22342 | |||||||||
| ACC11530_1 | |||||||||
| Associated_feature | WBsf988131 | ||||||||
| WBsf988132 | |||||||||
| WBsf1012361 | |||||||||
| WBsf223148 | |||||||||
| WBsf223149 | |||||||||
| WBsf223150 | |||||||||
| WBsf223151 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029326 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00060922 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081183 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060923 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011344 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060921 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041477 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060924 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3536 | ||||||||
| Expr3550 | |||||||||
| Expr8490 | |||||||||
| Expr9443 | |||||||||
| Expr1015191 | |||||||||
| Expr1145504 | |||||||||
| Expr2012045 | |||||||||
| Expr2030281 | |||||||||
| Drives_construct | WBCnstr00011460 | ||||||||
| WBCnstr00013319 | |||||||||
| WBCnstr00028241 | |||||||||
| Construct_product | WBCnstr00011474 | ||||||||
| WBCnstr00014008 | |||||||||
| WBCnstr00028241 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | II | Position | -0.384 | Error | 0.000779 | |||
| Positive | Positive_clone | C29F5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031066 | ||||||||
| WBPaper00034662 | |||||||||
| WBPaper00038444 | |||||||||
| WBPaper00061065 | |||||||||
| WBPaper00064863 | |||||||||
| WBPaper00065135 | |||||||||
| WBPaper00065693 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
