WormBase Tree Display for Gene: WBGene00016216

WBGene00016216 SMap: S_parent: Sequence: C29F9
  Identity: Version: 2
    Name: CGC_name: pals-22 Person_evidence: WBPerson260
      Sequence_name: C29F9.1
      Molecular_name: C29F9.1
        WP:CE08449
        CE08449
        C29F9.1.1
      Other_name: CELE_C29F9.1 Accession_evidence: NDB BX284603
      Public_name: pals-22
    DB_info: Database: AceView gene 3A751
        WormQTL gene WBGene00016216
        WormFlux gene WBGene00016216
        NDB locus_tag CELE_C29F9.1
        NCBI gene 175180
        RefSeq mRNA NM_064751.1
          protein NP_497152.1
            NM_064751.4
        TREEFAM TREEFAM_ID TF343430
        UniProt UniProtAcc Q9TZB2
        TrEMBL UniProtAcc Q9TZB2
        UniProt_GCRP UniProtAcc Q9TZB2
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 26 Oct 2016 09:42:35 WBPerson2970 Name_change: CGC_name: pals-22
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pals
    Allele (124)
    Strain (11)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP3012
    Ortholog: WBGene00061028 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00061022 Caenorhabditis remanei From_analysis: TreeFam
      chrIII_pilon.g6711 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00008858 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00022345 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00020540 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00016281 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Expressed in several structures, including nervous system and pharynx. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C29F9.1
    Corresponding_transcript: C29F9.1.1
    Associated_feature: WBsf224335
  Experimental_info: RNAi_result (17)
    Expr_pattern: Expr14986
      Expr16350
      Expr1013157
      Expr1036940
      Expr1145514
      Expr2014695
      Expr2032930
    Drives_construct: WBCnstr00028240
    Construct_product: WBCnstr00028240
      WBCnstr00039127
    Regulate_expr_cluster: WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056034:pals-22(jy3)_upregulated
      WBPaper00064532:pals-22(jy3)_downregulated
      WBPaper00064532:pals-22(jy3)_upregulated
    Antibody: WBAntibody00003057
    Microarray_results (14)
    Expression_cluster (93)
    Interaction (36)
  Map_info: Map: III Position: -26.9837
    Positive: Positive_clone: C29F9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (25)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene