WormBase Tree Display for Gene: WBGene00016291
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| WBGene00016291 | SMap | S_parent | Sequence | C31H1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | oops-1 | Person_evidence | WBPerson219 | |||||
| WBPerson22686 | |||||||||
| Sequence_name | C31H1.8 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_C31H1.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | oops-1 | ||||||||
| DB_info | Database | AceView | gene | 4G576 | |||||
| WormQTL | gene | WBGene00016291 | |||||||
| WormFlux | gene | WBGene00016291 | |||||||
| NDB | locus_tag | CELE_C31H1.8 | |||||||
| NCBI | gene | 177351 | |||||||
| RefSeq | protein | NM_001380244.1 | |||||||
| NM_001306860.4 | |||||||||
| NM_001380243.1 | |||||||||
| NM_068467.6 | |||||||||
| TrEMBL | UniProtAcc | Q18343 | |||||||
| V6CKF6 | |||||||||
| V6CJA4 | |||||||||
| V6CLT1 | |||||||||
| UniProt_GCRP | UniProtAcc | Q18343 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Aug 2020 16:39:37 | WBPerson1983 | Name_change | CGC_name | oops-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | oops | ||||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Structured_description | Automated_description | Enriched in AVE; SIB; germ line; and germline precursor cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including manganese chloride; bisphenol S; and Alovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C31H1.8a | |||||||
| C31H1.8b | |||||||||
| C31H1.8c | |||||||||
| C31H1.8d | |||||||||
| Corresponding_CDS_history | C31H1.8:wp202 | ||||||||
| Corresponding_transcript | C31H1.8a.1 | ||||||||
| C31H1.8b.1 | |||||||||
| C31H1.8c.1 | |||||||||
| C31H1.8d.1 | |||||||||
| Other_sequence | CBC09543_1 | ||||||||
| CBC13142_1 | |||||||||
| Associated_feature | WBsf651817 | ||||||||
| WBsf717145 | |||||||||
| WBsf996601 | |||||||||
| WBsf996602 | |||||||||
| WBsf996603 | |||||||||
| WBsf1017430 | |||||||||
| WBsf230114 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00085607 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00077895 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008471 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041628 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010664 | ||||||||
| Expr1036967 | |||||||||
| Expr1145651 | |||||||||
| Expr2001286 | |||||||||
| Expr2019509 | |||||||||
| Drives_construct | WBCnstr00028186 | ||||||||
| Construct_product | WBCnstr00028186 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (147) | |||||||||
| Interaction (239) | |||||||||
| Map_info | Map | IV | Position | 2.41053 | |||||
| Positive | Positive_clone | C31H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00052957 | ||||||||
| WBPaper00063107 | |||||||||
| WBPaper00063113 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
