WormBase Tree Display for Gene: WBGene00016346

WBGene00016346 SMap: S_parent: Sequence: C33E10
  Identity: Version: 2
    Name: CGC_name: fbxa-120 Person_evidence: WBPerson655
      Sequence_name: C33E10.2
      Molecular_name: C33E10.2
        C33E10.2.1
        CE17491
      Other_name: CELE_C33E10.2 Accession_evidence: NDB BX284606
      Public_name: fbxa-120
    DB_info: Database: AceView gene XR913
        WormQTL gene WBGene00016346
        WormFlux gene WBGene00016346
        NDB locus_tag CELE_C33E10.2
        Panther gene CAEEL|WormBase=WBGene00016346|UniProtKB=O61800
          family PTHR23015
        NCBI gene 183161
        RefSeq protein NM_078406.4
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc O61800
        UniProt_GCRP UniProtAcc O61800
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-120
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (22)
    RNASeq_FPKM (74)
    Ortholog (21)
    Paralog (223)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalppppppp; ABplpppapa; germ line; male distal tip cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including dpy-10; sir-2.1; and clk-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including rotenone; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C33E10.2
    Corresponding_transcript: C33E10.2.1
    Associated_feature: WBsf236891
  Experimental_info: RNAi_result: WBRNAi00041766 Inferred_automatically: RNAi_primary
      WBRNAi00011538 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014142
      Expr1036998
      Expr1145786
      Expr2011465
      Expr2029703
    Drives_construct: WBCnstr00028146
    Construct_product: WBCnstr00028146
    Microarray_results (16)
    Expression_cluster (138)
    Interaction: WBInteraction000112259
      WBInteraction000307841
      WBInteraction000307842
      WBInteraction000423915
      WBInteraction000464477
      WBInteraction000464504
      WBInteraction000464505
      WBInteraction000464506
      WBInteraction000464507
  Map_info: Map: X Position: 24.0877
    Positive: Positive_clone: C33E10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene