WormBase Tree Display for Gene: WBGene00016375

WBGene00016375 SMap: S_parent: Sequence: C33H5
  Identity: Version: 2
    Name: CGC_name: rpap-3 Person_evidence: WBPerson3828
      Sequence_name: C33H5.8
      Molecular_name: C33H5.8
        C33H5.8.1
        CE04151
      Other_name: CELE_C33H5.8 Accession_evidence: NDB BX284604
      Public_name: rpap-3
    DB_info: Database: AceView gene 4I542
        WormQTL gene WBGene00016375
        WormFlux gene WBGene00016375
        NDB locus_tag CELE_C33H5.8
        Panther gene CAEEL|WormBase=WBGene00016375|UniProtKB=Q18405
          family PTHR45984
        NCBI gene 183187
        RefSeq protein NM_068881.2
        TREEFAM TREEFAM_ID TF317515
        TrEMBL UniProtAcc Q18405
        UniProt_GCRP UniProtAcc Q18405
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 11 Oct 2017 16:33:09 WBPerson1983 Name_change: CGC_name: rpap-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpap
    Allele (12)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP4252
      CEOP4663
    Ortholog (33)
    Paralog: WBGene00000500 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006781 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015916 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019893 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019983 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in germ line; head mesodermal cell; intestine; muscle cell; and neurons based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including sir-2.1; set-2; and ain-1 based on RNA-seq and microarray studies. Is affected by eight chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: RNA-polymerase II-associated protein 3-like, C-terminal domain; Tetratricopeptide repeat; Potential Monad-binding region of RPAP3; and Tetratricopeptide-like helical domain superfamily. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C33H5.8
    Corresponding_transcript: C33H5.8.1
    Other_sequence: CBC02458_1
      CRC12151_1
    Associated_feature: WBsf668053
      WBsf230321
  Experimental_info: RNAi_result: WBRNAi00061747 Inferred_automatically: RNAi_primary
      WBRNAi00106373 Inferred_automatically: RNAi_primary
      WBRNAi00029493 Inferred_automatically: RNAi_primary
      WBRNAi00041820 Inferred_automatically: RNAi_primary
      WBRNAi00011571 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011221
      Expr1037010
      Expr1145834
      Expr2001364
      Expr2019588
    Drives_construct: WBCnstr00028121
    Construct_product: WBCnstr00028121
    Microarray_results (18)
    Expression_cluster (72)
    Interaction (13)
  Map_info: Positive: Positive_clone: C33H5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 3.475
  Reference: WBPaper00038491
    WBPaper00042465
    WBPaper00055090
    WBPaper00060878
  Method: Gene