WormBase Tree Display for Gene: WBGene00016505
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WBGene00016505 | SMap | S_parent | Sequence | C37C3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ttr-33 | |||||||
Sequence_name | C37C3.13 | ||||||||
Molecular_name | C37C3.13 | ||||||||
C37C3.13.1 | |||||||||
CE32820 | |||||||||
Other_name | CELE_C37C3.13 | Accession_evidence | NDB | BX284605 | |||||
Public_name | ttr-33 | ||||||||
DB_info | Database | AceView | gene | 5I318 | |||||
WormQTL | gene | WBGene00016505 | |||||||
WormFlux | gene | WBGene00016505 | |||||||
NDB | locus_tag | CELE_C37C3.13 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016505|UniProtKB=Q8I7H9 | |||||||
family | PTHR21700 | ||||||||
NCBI | gene | 259631 | |||||||
RefSeq | protein | NM_182392.8 | |||||||
SwissProt | UniProtAcc | Q8I7H9 | |||||||
TREEFAM | TREEFAM_ID | TF315773 | |||||||
UniProt_GCRP | UniProtAcc | Q8I7H9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-33 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ttr | ||||||||
Allele (19) | |||||||||
Strain | WBStrain00034704 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00083956 | ||||||||
00083957 | |||||||||
00122104 | |||||||||
Contained_in_operon | CEOP5567 | ||||||||
Ortholog (29) | |||||||||
Paralog (62) | |||||||||
Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. Expressed in head; hypodermis; pharynx; and posterior arcade cell. Used to study Parkinson's disease. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Experimental_model | DOID:14330 | Homo sapiens | Paper_evidence | WBPaper00053620 | ||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 04 Mar 2019 00:00:00 | ||||||||
Models_disease_asserted | WBDOannot00000641 | ||||||||
WBDOannot00000642 | |||||||||
WBDOannot00000643 | |||||||||
WBDOannot00000644 | |||||||||
WBDOannot00000645 | |||||||||
Molecular_info | Corresponding_CDS | C37C3.13 | |||||||
Corresponding_transcript | C37C3.13.1 | ||||||||
Other_sequence (69) | |||||||||
Associated_feature | WBsf652799 | ||||||||
WBsf233993 | |||||||||
WBsf233994 | |||||||||
Experimental_info | RNAi_result | WBRNAi00042105 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr13716 | ||||||||
Expr1017171 | |||||||||
Expr1146106 | |||||||||
Expr2017599 | |||||||||
Expr2035738 | |||||||||
Drives_construct | WBCnstr00028011 | ||||||||
WBCnstr00039953 | |||||||||
Construct_product | WBCnstr00028011 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (154) | |||||||||
Map_info | Map | V | Position | 0.913955 | Error | 0.001023 | |||
Positive | Positive_clone | C37C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00053620 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |