WormBase Tree Display for Gene: WBGene00016553
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| WBGene00016553 | SMap | S_parent | Sequence | C40A11 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | mir-8199 | Person_evidence | WBPerson13176 | ||||||
| Sequence_name | C40A11.10 | |||||||||
| Molecular_name | C40A11.10 | |||||||||
| C40A11.10.1 | ||||||||||
| C40A11.10.2 | ||||||||||
| C40A11.10a | ||||||||||
| C40A11.10b | ||||||||||
| Other_name | cel-mir-8199 | Remark | miRBase v.21 | |||||||
| CELE_C40A11.10 | Accession_evidence | NDB | BX284602 | |||||||
| Public_name | mir-8199 | |||||||||
| DB_info | Database | AceView | gene | 2C426 | ||||||
| WormQTL | gene | WBGene00016553 | ||||||||
| WormFlux | gene | WBGene00016553 | ||||||||
| NDB | locus_tag | CELE_C40A11.10 | ||||||||
| NCBI | gene | 28661641 | ||||||||
| RefSeq | protein | NR_138489.1 | ||||||||
| RNAcentral | URSid | URS00009DBBBF | ||||||||
| URS00009FCC19 | ||||||||||
| URS0000A6E0DD | ||||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 01 Jul 2016 14:59:01 | WBPerson1983 | Event | Changed_class | CDS | Transcript | ||||
| 3 | 24 Apr 2017 12:37:02 | WBPerson2970 | Name_change | CGC_name | mir-8199 | |||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001265 | ||||||||
| Gene_class | mir | |||||||||
| Allele (41) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Structured_description | Automated_description | Enriched in GABAergic neurons; NSM; and head mesodermal cell based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including stavudine; Zidovudine; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C40A11.10:wp254 | ||||||||
| Corresponding_transcript | C40A11.10 | |||||||||
| C40A11.10.1 | ||||||||||
| C40A11.10.2 | ||||||||||
| C40A11.10a | ||||||||||
| C40A11.10b | ||||||||||
| Associated_feature | WBsf649914 | |||||||||
| WBsf665385 | ||||||||||
| WBsf665386 | ||||||||||
| WBsf986882 | ||||||||||
| WBsf986883 | ||||||||||
| Experimental_info | RNAi_result | WBRNAi00042239 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00011805 | Inferred_automatically | RNAi_primary | ||||||||
| Expr_pattern | Expr1025969 | |||||||||
| Expr1037097 | ||||||||||
| Expr1146231 | ||||||||||
| Expression_cluster (88) | ||||||||||
| Map_info | Positive | Positive_clone | C40A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | -13.8439 | ||||||||
| Reference | WBPaper00035199 | |||||||||
| Method | Gene |
