WormBase Tree Display for Gene: WBGene00016601

WBGene00016601 SMap: S_parent: Sequence: CHROMOSOME_I
  Identity: Version: 3
    Name: CGC_name: acin-1 Person_evidence: WBPerson9844
      Sequence_name: C43E11.1
      Molecular_name: C43E11.1
        C43E11.1.1
        CE23592
      Other_name: CELE_C43E11.1 Accession_evidence: NDB BX284601
      Public_name: acin-1
    DB_info: Database: AceView gene 1E841
        WormQTL gene WBGene00016601
        WormFlux gene WBGene00016601
        NDB locus_tag CELE_C43E11.1
        Panther gene CAEEL|WormBase=WBGene00016601|UniProtKB=P91156
          family PTHR46589
        NCBI gene 172030
        RefSeq protein NM_058943.7
        TREEFAM TREEFAM_ID TF320727
        TrEMBL UniProtAcc P91156
        UniProt_GCRP UniProtAcc P91156
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 16 Jan 2006 17:09:08 WBPerson2970 Name_change: CGC_name: cogc-5
        3 05 Aug 2009 09:22:32 WBPerson9133 Name_change: CGC_name: acin-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: acin
    Allele (49)
    RNASeq_FPKM (74)
    GO_annotation: 00050174
      00050175
      00050176
      00050177
      00050178
      00050179
      00122173
      00122174
    Ortholog (33)
    Structured_description: Concise_description: acin-1 encodes an ortholog of human ACIN1 (OMIM:604562, which induces apoptotic chromatin condensation) and Drosophila HOOK-LIKE. Curator_confirmed: WBPerson567
          Date_last_updated: 18 Aug 2009 00:00:00
      Automated_description: Predicted to enable RNA binding activity. Involved in gonad morphogenesis and regulation of cell migration. Predicted to be part of ASAP complex. Is an ortholog of human ACIN1 (apoptotic chromatin condensation inducer 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C43E11.1
    Corresponding_transcript: C43E11.1.1
    Other_sequence (17)
    Associated_feature: WBsf643201
      WBsf656191
      WBsf983371
      WBsf983372
      WBsf217515
  Experimental_info: RNAi_result: WBRNAi00007770 Inferred_automatically: RNAi_primary
      WBRNAi00042378 Inferred_automatically: RNAi_primary
      WBRNAi00001524 Inferred_automatically: RNAi_primary
      WBRNAi00003137 Inferred_automatically: RNAi_primary
      WBRNAi00020715 Inferred_automatically: RNAi_primary
      WBRNAi00029757 Inferred_automatically: RNAi_primary
      WBRNAi00116603 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023756
      Expr1037127
      Expr1146366
      Expr2009147
      Expr2027384
    Microarray_results (21)
    Expression_cluster (85)
    Interaction (32)
  Map_info: Map: I Position: -1.51036 Error: 0.002556
    Positive: Positive_clone: C43E11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00064064
    WBPaper00064339
  Remark: C43E11.1 was originally assigned in error to cogc-5. Paper_evidence: WBPaper00026979
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene