WormBase Tree Display for Gene: WBGene00016717
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| WBGene00016717 | SMap | S_parent | Sequence | C46F9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | math-22 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C46F9.1 | ||||||||
| Molecular_name | C46F9.1a | ||||||||
| C46F9.1a.1 | |||||||||
| CE08768 | |||||||||
| C46F9.1b | |||||||||
| Other_name | CELE_C46F9.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | math-22 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-22 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | math | ||||||||
| Allele (168) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00143314 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | |||||
| Csp11.Scaffold630.g19300 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold630.g19304 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| chrII_pilon.g3519 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (82) | |||||||||
| Structured_description | Automated_description | Enriched in ASER and intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and rrf-3 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including rotenone; Tunicamycin; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C46F9.1a | |||||||
| Corresponding_CDS_history | C46F9.1:wp88 | ||||||||
| C46F9.1:wp239 | |||||||||
| Corresponding_transcript | C46F9.1b | ||||||||
| C46F9.1a.1 | |||||||||
| Associated_feature | WBsf657367 | ||||||||
| WBsf657368 | |||||||||
| WBsf657369 | |||||||||
| WBsf657370 | |||||||||
| WBsf657371 | |||||||||
| WBsf657372 | |||||||||
| WBsf657373 | |||||||||
| WBsf1011649 | |||||||||
| WBsf220892 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029872 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012042 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1146598 | ||||||||
| Expr2013399 | |||||||||
| Expr2031633 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (144) | |||||||||
| Interaction | WBInteraction000451543 | ||||||||
| WBInteraction000456577 | |||||||||
| Map_info | Map | II | Position | -14.2001 | Error | 0.002074 | |||
| Positive | Positive_clone | C46F9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
