WormBase Tree Display for Gene: WBGene00016738
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| WBGene00016738 | SMap | S_parent | Sequence | C47D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C47D2.1 | |||||||
| Molecular_name | C47D2.1 | ||||||||
| C47D2.1.1 | |||||||||
| CE06961 | |||||||||
| Other_name | CELE_C47D2.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C47D2.1 | ||||||||
| DB_info | Database | AceView | gene | XI831 | |||||
| WormQTL | gene | WBGene00016738 | |||||||
| WormFlux | gene | WBGene00016738 | |||||||
| NDB | locus_tag | CELE_C47D2.1 | |||||||
| NCBI | gene | 183545 | |||||||
| RefSeq | protein | NM_076984.5 | |||||||
| TREEFAM | TREEFAM_ID | TF319900 | |||||||
| TrEMBL | UniProtAcc | Q22923 | |||||||
| UniProt_GCRP | UniProtAcc | Q22923 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00076748 | ||||||||
| Ortholog (17) | |||||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell; intestine; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including pgl-1; aak-2; and isp-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including D-glucose; Psoralens; and allantoin based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C47D2.1 | |||||||
| Corresponding_transcript | C47D2.1.1 | ||||||||
| Associated_feature | WBsf236032 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00029905 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042670 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012072 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022147 | ||||||||
| Expr1146657 | |||||||||
| Expr2001710 | |||||||||
| Expr2019937 | |||||||||
| Drives_construct | WBCnstr00027841 | ||||||||
| Construct_product | WBCnstr00027841 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (128) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Positive | Positive_clone | C47D2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -0.338406 | |||||||
| Method | Gene |
