WormBase Tree Display for Gene: WBGene00016782
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| WBGene00016782 | SMap | S_parent | Sequence | C49G7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | phat-3 | Person_evidence | WBPerson980 | |||||
| WBPerson3905 | |||||||||
| Sequence_name | C49G7.4 | ||||||||
| Molecular_name | C49G7.4 | ||||||||
| C49G7.4.1 | |||||||||
| CE08862 | |||||||||
| Other_name | CEMSE03 | Paper_evidence | WBPaper00012240 | ||||||
| CELE_C49G7.4 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | phat-3 | ||||||||
| DB_info | Database | AceView | gene | 5E523 | |||||
| WormQTL | gene | WBGene00016782 | |||||||
| WormFlux | gene | WBGene00016782 | |||||||
| NDB | locus_tag | CELE_C49G7.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016782|UniProtKB=O16225 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 178809 | |||||||
| RefSeq | protein | NM_071728.6 | |||||||
| TREEFAM | TREEFAM_ID | TF317956 | |||||||
| TrEMBL | UniProtAcc | O16225 | |||||||
| UniProt_GCRP | UniProtAcc | O16225 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Feb 2006 09:28:57 | WBPerson2970 | Name_change | CGC_name | phat-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | phat | ||||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00027491 | ||||||||
| Ortholog (27) | |||||||||
| Paralog (61) | |||||||||
| Structured_description | Automated_description | Involved in pharyngeal gland morphogenesis. Expressed in pharyngeal gland cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C49G7.4 | |||||||
| Corresponding_transcript | C49G7.4.1 | ||||||||
| Other_sequence | CSC00133_1 | ||||||||
| CBC01333_2 | |||||||||
| FD514448.1 | |||||||||
| Associated_feature | WBsf047525 | ||||||||
| WBsf1019457 | |||||||||
| WBsf231630 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00007335 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012155 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029990 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042824 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3428 | ||||||||
| Expr8575 | |||||||||
| Expr10165 | |||||||||
| Expr1146804 | |||||||||
| Expr2014884 | |||||||||
| Expr2033119 | |||||||||
| Drives_construct | WBCnstr00011394 | ||||||||
| WBCnstr00013373 | |||||||||
| WBCnstr00027806 | |||||||||
| Construct_product | WBCnstr00027806 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (203) | |||||||||
| Interaction (66) | |||||||||
| Map_info | Map | V | Position | -6.88975 | Error | 0.024419 | |||
| Positive | Positive_clone | C49G7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012240 | ||||||||
| WBPaper00032277 | |||||||||
| WBPaper00041771 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
