Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00016884

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00016884SMapS_parentSequenceC52E2
IdentityVersion1
NameSequence_nameC52E2.5
Molecular_nameC52E2.5
C52E2.5.1
CE25829
Other_nameC52E2.cCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
C52E2.eCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_C52E2.5Accession_evidenceNDBBX284602
Public_nameC52E2.5
DB_infoDatabaseAceViewgene2C120
WormQTLgeneWBGene00016884
WormFluxgeneWBGene00016884
NDBlocus_tagCELE_C52E2.5
PanthergeneCAEEL|WormBase=WBGene00016884|UniProtKB=Q9N4L1
familyPTHR23015
NCBIgene259418
RefSeqproteinNM_061690.5
TREEFAMTREEFAM_IDTF322099
TrEMBLUniProtAccQ9N4L1
UniProt_GCRPUniProtAccQ9N4L1
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (108)
RNASeq_FPKM (74)
Ortholog (14)
Paralog (221)
Structured_descriptionAutomated_descriptionEnriched in ABplapaaaa; ABprapaaaa; and intestine based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including Zidovudine; Rifampin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC52E2.5
Corresponding_transcriptC52E2.5.1
Associated_featureWBsf649901
Experimental_infoRNAi_resultWBRNAi00043042Inferred_automaticallyRNAi_primary
WBRNAi00012317Inferred_automaticallyRNAi_primary
Expr_patternExpr1023971
Expr1147002
Expr2001867
Expr2020093
Drives_constructWBCnstr00027727
Construct_productWBCnstr00027727
Microarray_results (14)
Expression_cluster (118)
Map_infoPositivePositive_cloneC52E2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-14.3148
MethodGene