WormBase Tree Display for Gene: WBGene00016884
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WBGene00016884 | SMap | S_parent | Sequence | C52E2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C52E2.5 | |||||||
Molecular_name | C52E2.5 | ||||||||
C52E2.5.1 | |||||||||
CE25829 | |||||||||
Other_name | C52E2.c | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
C52E2.e | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_C52E2.5 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | C52E2.5 | ||||||||
DB_info | Database | AceView | gene | 2C120 | |||||
WormQTL | gene | WBGene00016884 | |||||||
WormFlux | gene | WBGene00016884 | |||||||
NDB | locus_tag | CELE_C52E2.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016884|UniProtKB=Q9N4L1 | |||||||
family | PTHR23015 | ||||||||
NCBI | gene | 259418 | |||||||
RefSeq | protein | NM_061690.5 | |||||||
TREEFAM | TREEFAM_ID | TF322099 | |||||||
TrEMBL | UniProtAcc | Q9N4L1 | |||||||
UniProt_GCRP | UniProtAcc | Q9N4L1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (108) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (14) | |||||||||
Paralog (221) | |||||||||
Structured_description | Automated_description | Enriched in ABplapaaaa; ABprapaaaa; and intestine based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including Zidovudine; Rifampin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C52E2.5 | |||||||
Corresponding_transcript | C52E2.5.1 | ||||||||
Associated_feature | WBsf649901 | ||||||||
Experimental_info | RNAi_result | WBRNAi00043042 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012317 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023971 | ||||||||
Expr1147002 | |||||||||
Expr2001867 | |||||||||
Expr2020093 | |||||||||
Drives_construct | WBCnstr00027727 | ||||||||
Construct_product | WBCnstr00027727 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (118) | |||||||||
Map_info | Positive | Positive_clone | C52E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -14.3148 | |||||||
Method | Gene |