WormBase Tree Display for Gene: WBGene00016976
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| WBGene00016976 | SMap | S_parent | Sequence | C56E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C56E10.3 | |||||||
| Molecular_name | C56E10.3a | ||||||||
| C56E10.3a.1 | |||||||||
| CE53456 | |||||||||
| C56E10.3b | |||||||||
| CE53201 | |||||||||
| C56E10.3b.1 | |||||||||
| Other_name | CELE_C56E10.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C56E10.3 | ||||||||
| DB_info | Database | AceView | gene | XH271 | |||||
| WormQTL | gene | WBGene00016976 | |||||||
| WormFlux | gene | WBGene00016976 | |||||||
| NDB | locus_tag | CELE_C56E10.3 | |||||||
| NCBI | gene | 183863 | |||||||
| RefSeq | protein | NM_001373334.3 | |||||||
| NM_001373333.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF315728 | |||||||
| TrEMBL | UniProtAcc | H2KZ08 | |||||||
| G1K0V0 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZ08 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (105) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell; excretory cell; intestine; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including Tunicamycin; Zidovudine; and Sodium Chloride based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C56E10.3a | |||||||
| C56E10.3b | |||||||||
| Corresponding_CDS_history | C56E10.3:wp154 | ||||||||
| C56E10.3a:wp226 | |||||||||
| C56E10.3a:wp271 | |||||||||
| C56E10.3b:wp226 | |||||||||
| C56E10.3b:wp271 | |||||||||
| Corresponding_transcript | C56E10.3a.1 | ||||||||
| C56E10.3b.1 | |||||||||
| Associated_feature | WBsf648241 | ||||||||
| WBsf982186 | |||||||||
| WBsf1005611 | |||||||||
| WBsf1023126 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076248 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00023976 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023105 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012463 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030202 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043274 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023688 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012464 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023176 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043273 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016509 | ||||||||
| Expr1147252 | |||||||||
| Expr2001977 | |||||||||
| Expr2020201 | |||||||||
| Drives_construct | WBCnstr00027663 | ||||||||
| Construct_product | WBCnstr00027663 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (133) | |||||||||
| Interaction (83) | |||||||||
| Map_info | Positive | Positive_clone | C56E10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -2.62948 | |||||||
| Method | Gene |
