WormBase Tree Display for Gene: WBGene00016977
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| WBGene00016977 | SMap | S_parent | Sequence | C56G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | akap-1 | Person_evidence | WBPerson547 | |||||
| Sequence_name | C56G2.1 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | CELE_C56G2.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | akap-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Jul 2013 14:01:25 | WBPerson2970 | Name_change | CGC_name | akap-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | akap | ||||||||
| Allele (176) | |||||||||
| Strain | WBStrain00026610 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003112 | ||||||||
| 00003113 | |||||||||
| 00003114 | |||||||||
| 00053220 | |||||||||
| 00053221 | |||||||||
| 00122479 | |||||||||
| 00122480 | |||||||||
| Contained_in_operon | CEOP3856 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00004684 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00009052 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016203 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021419 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017992 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be located in membrane. Expressed in several structures, including gonad and neurons. Is an ortholog of human AKAP1 (A-kinase anchoring protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C56G2.1a | |||||||
| C56G2.1b | |||||||||
| C56G2.1c | |||||||||
| C56G2.1d | |||||||||
| C56G2.1e | |||||||||
| Corresponding_transcript | C56G2.1a.1 | ||||||||
| C56G2.1b.1 | |||||||||
| C56G2.1c.1 | |||||||||
| C56G2.1d.1 | |||||||||
| C56G2.1e.1 | |||||||||
| Other_sequence (33) | |||||||||
| Associated_feature (37) | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr4039 | ||||||||
| Expr4585 | |||||||||
| Expr13027 | |||||||||
| Expr1016931 | |||||||||
| Expr1037287 | |||||||||
| Expr1147262 | |||||||||
| Expr2009281 | |||||||||
| Expr2027518 | |||||||||
| Drives_construct | WBCnstr00012094 | ||||||||
| WBCnstr00027662 | |||||||||
| Construct_product | WBCnstr00027662 | ||||||||
| WBCnstr00038397 | |||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (173) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | III | Position | -1.36646 | |||||
| Positive | Positive_clone | C56G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029208 | ||||||||
| WBPaper00029254 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042805 | |||||||||
| WBPaper00046432 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058216 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
