WormBase Tree Display for Gene: WBGene00017039
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| WBGene00017039 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | trk-1 | Person_evidence | WBPerson4023 | |||||
| Sequence_name | D1073.1 | ||||||||
| Molecular_name | D1073.1 | ||||||||
| D1073.1.1 | |||||||||
| CE53483 | |||||||||
| Other_name | CELE_D1073.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | trk-1 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00017039 | |||||
| WormFlux | gene | WBGene00017039 | |||||||
| NDB | locus_tag | CELE_D1073.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017039|UniProtKB=G4RZJ9 | |||||||
| family | PTHR24418 | ||||||||
| NCBI | gene | 183575 | |||||||
| RefSeq | protein | NM_001373402.5 | |||||||
| TrEMBL | UniProtAcc | A0A4V0IL59 | |||||||
| UniProt_GCRP | UniProtAcc | A0A4V0IL59 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Aug 2006 13:13:12 | WBPerson2970 | Name_change | CGC_name | trk-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | trk | ||||||||
| Allele (157) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (27) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Concise_description | trk-1 encodes a receptor tyrosine kinase that is most closely related to the vertebrate neurotrophin receptors. | Paper_evidence | WBPaper00027258 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 11 Jun 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable non-membrane spanning protein tyrosine kinase activity and signaling receptor binding activity. Predicted to be involved in cell differentiation; innate immune response; and transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to be extrinsic component of cytoplasmic side of plasma membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D1073.1 | |||||||
| Corresponding_CDS_history | D1073.1:wp102 | ||||||||
| D1073.1:wp156 | |||||||||
| D1073.1:wp163 | |||||||||
| D1073.1a:wp271 | |||||||||
| D1073.1b:wp271 | |||||||||
| Corresponding_transcript | D1073.1.1 | ||||||||
| Other_sequence | ACC28704_1 | ||||||||
| EY459401.1 | |||||||||
| CRC11782_1 | |||||||||
| Oden_isotig19047 | |||||||||
| Associated_feature | WBsf1006286 | ||||||||
| WBsf1023487 | |||||||||
| WBsf1023488 | |||||||||
| WBsf237737 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012547 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043408 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043407 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012099 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028958 | ||||||||
| Expr1147393 | |||||||||
| Expr2017497 | |||||||||
| Expr2035636 | |||||||||
| Drives_construct | WBCnstr00027617 | ||||||||
| Construct_product | WBCnstr00027617 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction (108) | |||||||||
| Map_info | Map | X | Position | 0.466501 | Error | 0.001647 | |||
| Positive | Positive_clone | D1073 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027258 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049490 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
