WormBase Tree Display for Gene: WBGene00017221

WBGene00017221 SMap: S_parent: Sequence: F07G6
  Identity: Version: 2
    Name: CGC_name: dgn-3 Person_evidence: WBPerson345
      Sequence_name: F07G6.1
      Molecular_name: F07G6.1
        F07G6.1.1
        CE53665
      Other_name: CELE_F07G6.1 Accession_evidence: NDB BX284606
      Public_name: dgn-3
    DB_info: Database: AceView gene XC341
        WormQTL gene WBGene00017221
        WormFlux gene WBGene00017221
        NDB locus_tag CELE_F07G6.1
        Panther gene CAEEL|WormBase=WBGene00017221|UniProtKB=Q19173
          family PTHR21559
        NCBI gene 184149
        RefSeq protein NM_075918.3
        TREEFAM TREEFAM_ID TF343420
        TrEMBL UniProtAcc Q19173
        UniProt_GCRP UniProtAcc Q19173
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Feb 2005 16:32:53 WBPerson2970 Name_change: CGC_name: dgn-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dgn
    Allele (109)
    Strain: WBStrain00005039
    RNASeq_FPKM (74)
    GO_annotation: 00063725
      00122657
    Ortholog: WBGene00132739 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00066675 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      FL83_04054 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_022822 Caenorhabditis remanei From_analysis: WormBase-Compara
    Paralog: WBGene00018943 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to be located in membrane. Predicted to be part of dystrophin-associated glycoprotein complex. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F07G6.1
    Corresponding_CDS_history: F07G6.1:wp184
      F07G6.1:wp272
    Corresponding_transcript: F07G6.1.1
    Associated_feature: WBsf1022341
  Experimental_info: RNAi_result: WBRNAi00043932 Inferred_automatically: RNAi_primary
      WBRNAi00012844 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018407
      Expr1147905
      Expr2010869
      Expr2029108
    Microarray_results (15)
    Expression_cluster (24)
    SAGE_tag: SAGE:tttttgttat Strand: Antisense
      SAGE:tatccaaatgtatagtg Strand: Antisense
      SAGE:cacttcaaac Strand: Antisense
      SAGE:acaattgtgt Strand: Sense
        Unambiguously_mapped
      SAGE:gaaatcctgt Strand: Sense
        Unambiguously_mapped
      SAGE:tccgcgaaaatgtgaca Strand: Sense
        Unambiguously_mapped
    Interaction (32)
  Map_info: Map: X Position: -17.6467 Error: 0.046728
    Positive: Positive_clone: F07G6 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5050
    Pseudo_map_position
  Reference: WBPaper00027231
    WBPaper00027321
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene