WormBase Tree Display for Gene: WBGene00017342
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| WBGene00017342 | SMap | S_parent | Sequence | F10D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F10D7.5 | |||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_F10D7.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F10D7.5 | ||||||||
| DB_info | Database | AceView | gene | XR998 | |||||
| WormQTL | gene | WBGene00017342 | |||||||
| WormFlux | gene | WBGene00017342 | |||||||
| NDB | locus_tag | CELE_F10D7.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017342|UniProtKB=Q7JP67 | |||||||
| family | PTHR12429 | ||||||||
| NCBI | gene | 181767 | |||||||
| RefSeq | protein | NM_001392919.1 | |||||||
| NM_078418.4 | |||||||||
| NM_078417.6 | |||||||||
| NM_078416.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF314368 | |||||||
| TrEMBL | UniProtAcc | Q8MQ80 | |||||||
| Q7JP66 | |||||||||
| Q7JP67 | |||||||||
| Q7JP65 | |||||||||
| UniProt_GCRP | UniProtAcc | Q7JP67 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (119) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082302 | ||||||||
| Contained_in_operon | CEOPX161 | ||||||||
| Ortholog (44) | |||||||||
| Structured_description | Concise_description | F10D7.5 encodes an ortholog of Drosophila NEURALIZED, and thus mayparticipate in GLP-1/LIN-12 signalling; the promoter or 5'protein-coding regions of F10D7.5 are bound by DAF-16 in vivo, andF10D7.5 expression drops by roughly one-half in daf-16(mu86) mutants. | Paper_evidence | WBPaper00027009 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 11 Dec 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable ubiquitin protein ligase activity. Is an ortholog of human NEURL1 (neuralized E3 ubiquitin protein ligase 1) and NEURL1B (neuralized E3 ubiquitin protein ligase 1B). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F10D7.5a | |||||||
| F10D7.5b | |||||||||
| F10D7.5c | |||||||||
| F10D7.5e | |||||||||
| Corresponding_CDS_history | F10D7.5a:wp86 | ||||||||
| F10D7.5a:wp121 | |||||||||
| F10D7.5a:wp123 | |||||||||
| F10D7.5b:wp121 | |||||||||
| F10D7.5c:wp121 | |||||||||
| F10D7.5c:wp123 | |||||||||
| F10D7.5d:wp86 | |||||||||
| F10D7.5d:wp121 | |||||||||
| Corresponding_transcript | F10D7.5a.1 | ||||||||
| F10D7.5b.1 | |||||||||
| F10D7.5c.1 | |||||||||
| F10D7.5e.1 | |||||||||
| Other_sequence (19) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00094664 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002141 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044253 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076289 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013057 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014331 | ||||||||
| Expr1037454 | |||||||||
| Expr1148211 | |||||||||
| Expr2002394 | |||||||||
| Expr2020612 | |||||||||
| Drives_construct | WBCnstr00027371 | ||||||||
| Construct_product | WBCnstr00027371 | ||||||||
| Microarray_results (47) | |||||||||
| Expression_cluster (116) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Positive | Positive_clone | F10D7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 24.0892 | |||||||
| Reference | WBPaper00027009 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
