WormBase Tree Display for Gene: WBGene00017543

WBGene00017543 SMap: S_parent: Sequence: F17E9
  Identity: Version: 2
    Name: CGC_name: lgc-5 Paper_evidence: WBPaper00029376
          Person_evidence: WBPerson1430
      Sequence_name: F17E9.7
      Molecular_name: F17E9.7
        F17E9.7.1
        CE49672
      Other_name: CELE_F17E9.7 Accession_evidence: NDB BX284604
      Public_name: lgc-5
    DB_info: Database: AceView gene 4J109
        WormQTL gene WBGene00017543
        WormFlux gene WBGene00017543
        NDB locus_tag CELE_F17E9.7
        Panther gene CAEEL|WormBase=WBGene00017543|UniProtKB=O61520
          family PTHR18945
        NCBI gene 184620
        RefSeq protein NM_069010.5
        TREEFAM TREEFAM_ID TF319821
        TrEMBL UniProtAcc O61520
        UniProt_GCRP UniProtAcc O61520
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 18 May 2007 16:58:23 WBPerson2970 Name_change: CGC_name: lgc-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    Allele (26)
    Strain: WBStrain00037893
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog (29)
    Paralog (100)
    Structured_description: Concise_description: lgc-53 encodes an amine-gated chloride channel. Paper_evidence: WBPaper00034683
          Curator_confirmed: WBPerson1843
          Date_last_updated: 28 Jul 2014 00:00:00
      Automated_description: Predicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in excitatory postsynaptic potential and monoatomic ion transmembrane transport. Predicted to be located in neuron projection and synapse. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F17E9.7
    Corresponding_CDS_history: F17E9.7:wp176
      F17E9.7:wp231
      F17E9.7:wp242
    Corresponding_transcript: F17E9.7.1
  Experimental_info: RNAi_result: WBRNAi00013476 Inferred_automatically: RNAi_primary
      WBRNAi00102738 Inferred_automatically: RNAi_primary
      WBRNAi00031083 Inferred_automatically: RNAi_primary
      WBRNAi00066359 Inferred_automatically: RNAi_primary
      WBRNAi00044898 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012907
      Expr1148869
      Expr2013136
      Expr2031368
    Microarray_results (17)
    Expression_cluster (35)
    SAGE_tag: SAGE:atgttcaaga Strand: Sense
        Unambiguously_mapped
      SAGE:ttcacacaaatgcaacg Strand: Sense
        Unambiguously_mapped
      SAGE:ttcatcatca Strand: Sense
        Unambiguously_mapped
      SAGE:tggaaaatcttgaatgt Strand: Antisense
    Interaction: WBInteraction000303648
      WBInteraction000417153
  Map_info: Map: IV Position: 3.71168 Error: 0.000677
    Positive: Positive_clone: F17E9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene