WormBase Tree Display for Gene: WBGene00017608
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| WBGene00017608 | SMap | S_parent | Sequence | F19F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ints-9 | Person_evidence | WBPerson5934 | |||||
| Sequence_name | F19F10.12 | ||||||||
| Molecular_name | F19F10.12 | ||||||||
| F19F10.12.1 | |||||||||
| CE27371 | |||||||||
| Other_name | CELE_F19F10.12 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ints-9 | ||||||||
| DB_info | Database | AceView | gene | 5I61 | |||||
| WormQTL | gene | WBGene00017608 | |||||||
| WormFlux | gene | WBGene00017608 | |||||||
| NDB | locus_tag | CELE_F19F10.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017608|UniProtKB=Q95ZM2 | |||||||
| family | PTHR46094 | ||||||||
| NCBI | gene | 179142 | |||||||
| RefSeq | protein | NM_072552.7 | |||||||
| TREEFAM | TREEFAM_ID | TF314100 | |||||||
| TrEMBL | UniProtAcc | Q95ZM2 | |||||||
| UniProt_GCRP | UniProtAcc | Q95ZM2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 May 2019 14:10:26 | WBPerson1983 | Name_change | CGC_name | ints-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ints | ||||||||
| Allele (80) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00090132 | ||||||||
| 00090133 | |||||||||
| 00122955 | |||||||||
| 00122956 | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00008642 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00013460 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017313 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to be involved in snRNA 3'-end processing. Predicted to be located in nucleus. Predicted to be part of integrator complex. Is an ortholog of human INTS9 (integrator complex subunit 9). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F19F10.12 | |||||||
| Corresponding_transcript | F19F10.12.1 | ||||||||
| Other_sequence | CBC06132_1 | ||||||||
| HCC06781_1 | |||||||||
| HC05294 | |||||||||
| Dviv_isotig23611 | |||||||||
| JI167842.1 | |||||||||
| Associated_feature | WBsf646947 | ||||||||
| WBsf661053 | |||||||||
| WBsf661425 | |||||||||
| WBsf661426 | |||||||||
| WBsf661427 | |||||||||
| WBsf231994 | |||||||||
| WBsf231995 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045023 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00106694 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106621 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012774 | ||||||||
| Expr1037565 | |||||||||
| Expr1148985 | |||||||||
| Expr2002751 | |||||||||
| Expr2020968 | |||||||||
| Drives_construct | WBCnstr00027164 | ||||||||
| Construct_product | WBCnstr00027164 | ||||||||
| Regulate_expr_cluster | WBPaper00056284:ints-9(RNAi)_downregulated | ||||||||
| WBPaper00056284:ints-9(RNAi)_upregulated | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (60) | |||||||||
| Interaction | WBInteraction000196971 | ||||||||
| WBInteraction000227953 | |||||||||
| WBInteraction000249013 | |||||||||
| WBInteraction000276530 | |||||||||
| WBInteraction000345644 | |||||||||
| WBInteraction000549211 | |||||||||
| WBInteraction000560318 | |||||||||
| WBInteraction000575006 | |||||||||
| Map_info | Positive | Positive_clone | F19F10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.813017 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056284 | |||||||||
| Method | Gene |
