WormBase Tree Display for Gene: WBGene00017886
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| WBGene00017886 | SMap | S_parent | Sequence | F28B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mfsd-13.1 | |||||||
| Sequence_name | F28B3.5 | ||||||||
| Molecular_name | F28B3.5a | ||||||||
| F28B3.5a.1 | |||||||||
| CE28826 | |||||||||
| F28B3.5b | |||||||||
| CE33383 | |||||||||
| F28B3.5b.1 | |||||||||
| Other_name | CELE_F28B3.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | mfsd-13.1 | ||||||||
| DB_info | Database | AceView | gene | 1F495 | |||||
| WormQTL | gene | WBGene00017886 | |||||||
| WormFlux | gene | WBGene00017886 | |||||||
| NDB | locus_tag | CELE_F28B3.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017886|UniProtKB=H2KZU5 | |||||||
| family | PTHR28658 | ||||||||
| NCBI | gene | 172111 | |||||||
| RefSeq | protein | NM_059077.6 | |||||||
| NM_001372665.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF313122 | |||||||
| TrEMBL | UniProtAcc | Q86NJ1 | |||||||
| H2KZU5 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZU5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 30 Mar 2020 18:09:47 | WBPerson1983 | Name_change | CGC_name | mfsd-13.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mfsd | ||||||||
| Allele (12) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022536 | ||||||||
| Contained_in_operon | CEOP1927 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00016174 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human MFSD13A (major facilitator superfamily domain containing 13A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28B3.5a | |||||||
| F28B3.5b | |||||||||
| Corresponding_transcript | F28B3.5a.1 | ||||||||
| F28B3.5b.1 | |||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf643254 | ||||||||
| WBsf217595 | |||||||||
| WBsf217596 | |||||||||
| WBsf217597 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00022846 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003509 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117070 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045789 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027906 | ||||||||
| Expr1037687 | |||||||||
| Expr1149701 | |||||||||
| Expr2003089 | |||||||||
| Expr2021303 | |||||||||
| Drives_construct | WBCnstr00026941 | ||||||||
| Construct_product | WBCnstr00026941 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | I | Position | -0.564869 | |||||
| Positive | Positive_clone | F28B3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
