WormBase Tree Display for Gene: WBGene00017931
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| WBGene00017931 | SMap | S_parent | Sequence | F29G9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | picc-1 | Paper_evidence | WBPaper00046751 | |||||
| Person_evidence | WBPerson440 | ||||||||
| Sequence_name | F29G9.2 | ||||||||
| Molecular_name | F29G9.2a | ||||||||
| F29G9.2a.1 | |||||||||
| CE27374 | |||||||||
| F29G9.2b | |||||||||
| CE09796 | |||||||||
| F29G9.2b.1 | |||||||||
| Other_name | CELE_F29G9.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | picc-1 | ||||||||
| DB_info | Database | AceView | gene | 5G505 | |||||
| WormQTL | gene | WBGene00017931 | |||||||
| WormFlux | gene | WBGene00017931 | |||||||
| NDB | locus_tag | CELE_F29G9.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017931|UniProtKB=H2KYP0 | |||||||
| family | PTHR13546 | ||||||||
| NCBI | gene | 3564810 | |||||||
| RefSeq | protein | NM_001383314.2 | |||||||
| NM_072159.7 | |||||||||
| SwissProt | UniProtAcc | H2KYP0 | |||||||
| TREEFAM | TREEFAM_ID | TF320243 | |||||||
| UniProt_GCRP | UniProtAcc | H2KYP0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 01 Jun 2015 15:07:11 | WBPerson2970 | Name_change | CGC_name | picc-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | picc | ||||||||
| Allele (115) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00021782 | ||||||||
| 00021783 | |||||||||
| 00021784 | |||||||||
| 00021785 | |||||||||
| Contained_in_operon | CEOP5096 | ||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Predicted to be located in adherens junction. Is an ortholog of human CCDC85C (coiled-coil domain containing 85C). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F29G9.2a | |||||||
| F29G9.2b | |||||||||
| Corresponding_transcript | F29G9.2a.1 | ||||||||
| F29G9.2b.1 | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature (23) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00062228 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103318 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014115 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045943 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031588 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002069 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12370 | ||||||||
| Expr13518 | |||||||||
| Expr1026171 | |||||||||
| Expr1037713 | |||||||||
| Expr1149840 | |||||||||
| Expr2014917 | |||||||||
| Expr2033152 | |||||||||
| Drives_construct | WBCnstr00020489 | ||||||||
| WBCnstr00026905 | |||||||||
| Construct_product | WBCnstr00020489 | ||||||||
| WBCnstr00020491 | |||||||||
| WBCnstr00026905 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction (122) | |||||||||
| Map_info | Map | V | Position | -0.440602 | |||||
| Positive | Positive_clone | F29G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056801 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
