WormBase Tree Display for Gene: WBGene00017959
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| WBGene00017959 | SMap | S_parent | Sequence | F31F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ugt-42 | Person_evidence | WBPerson1208 | |||||
| WBPerson655 | |||||||||
| Sequence_name | F31F4.7 | ||||||||
| Molecular_name | F31F4.7 | ||||||||
| F31F4.7.1 | |||||||||
| CE36837 | |||||||||
| Other_name | CELE_F31F4.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ugt-42 | ||||||||
| DB_info | Database | AceView | gene | 5B127 | |||||
| WormQTL | gene | WBGene00017959 | |||||||
| WormFlux | gene | WBGene00017959 | |||||||
| NDB | locus_tag | CELE_F31F4.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017959|UniProtKB=O17123 | |||||||
| family | PTHR48043 | ||||||||
| NCBI | gene | 185168 | |||||||
| RefSeq | protein | NM_070877.4 | |||||||
| TREEFAM | TREEFAM_ID | TF352368 | |||||||
| TrEMBL | UniProtAcc | O17123 | |||||||
| UniProt_GCRP | UniProtAcc | O17123 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Jun 2005 11:17:00 | WBPerson2970 | Name_change | CGC_name | ugt-42 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ugt | ||||||||
| Allele (132) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029359 | ||||||||
| 00029360 | |||||||||
| 00029361 | |||||||||
| 00029362 | |||||||||
| 00029363 | |||||||||
| 00029364 | |||||||||
| 00123221 | |||||||||
| Ortholog (52) | |||||||||
| Paralog (74) | |||||||||
| Structured_description | Automated_description | Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of human UGT3A1 (UDP glycosyltransferase family 3 member A1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F31F4.7 | |||||||
| Corresponding_CDS_history | F31F4.7:wp125 | ||||||||
| Corresponding_transcript | F31F4.7.1 | ||||||||
| Associated_feature | WBsf231358 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00014174 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00114470 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046052 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016024 | ||||||||
| Expr1149944 | |||||||||
| Expr2017788 | |||||||||
| Drives_construct | WBCnstr00026887 | ||||||||
| Construct_product | WBCnstr00026887 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction | WBInteraction000197350 | ||||||||
| WBInteraction000232412 | |||||||||
| WBInteraction000316859 | |||||||||
| WBInteraction000400095 | |||||||||
| WBInteraction000585747 | |||||||||
| Map_info | Map | V | Position | -19.971 | |||||
| Positive | Positive_clone | F31F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055433 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
