WormBase Tree Display for Gene: WBGene00017973
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WBGene00017973 | SMap | S_parent | Sequence | F32A6 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ift | ||||||
Allele (143) | |||||||
Strain | WBStrain00002530 | ||||||
WBStrain00036344 | |||||||
WBStrain00036504 | |||||||
WBStrain00007576 | |||||||
WBStrain00051699 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (16) | |||||||
Ortholog (32) | |||||||
Structured_description | Concise_description | ift-81 encodes an ortholog of the intraflagellar transport component IFT-81 in Chlamydomonas; ift-81 along with ift-74 is involved in growth, chemotaxis, intraflagellar transport and the morphogenesis of cilia; ift-81 binds ift-74 in protein binding assays and co-localizes with ift-74 to the transition zone of cilia in neurons, indicating that ift-81 may form a complex with ift-74. | Paper_evidence | WBPaper00030726 | |||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 27 Oct 2008 00:00:00 | ||||||
Automated_description | Enables microtubule binding activity. Involved in chemotaxis; detection of stimulus involved in sensory perception; and intraciliary transport. Located in non-motile cilium. Expressed in amphid neurons; chemosensory neurons; and phasmid neurons. Human ortholog(s) of this gene implicated in short-rib thoracic dysplasia 19 with or without polydactyly. Is an ortholog of human IFT81 (intraflagellar transport 81). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0080295 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14313) | ||
Molecular_info | Corresponding_CDS | F32A6.2 | |||||
Corresponding_CDS_history | F32A6.2:wp99 | ||||||
F32A6.2:wp182 | |||||||
F32A6.2:wp191 | |||||||
F32A6.2:wp196 | |||||||
F32A6.2:wp213 | |||||||
Corresponding_transcript | F32A6.2.1 | ||||||
Other_sequence | EL890803.1 | ||||||
BM01040 | |||||||
Associated_feature | WBsf648096 | ||||||
WBsf662772 | |||||||
WBsf662773 | |||||||
WBsf1005231 | |||||||
WBsf1005232 | |||||||
Experimental_info | RNAi_result | WBRNAi00031647 | Inferred_automatically | RNAi_primary | |||
WBRNAi00046081 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046082 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014197 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr4638 | ||||||
Expr5927 | |||||||
Expr8322 | |||||||
Expr1026677 | |||||||
Expr1037733 | |||||||
Expr1149971 | |||||||
Expr2012699 | |||||||
Expr2030935 | |||||||
Drives_construct | WBCnstr00003106 | ||||||
WBCnstr00012142 | |||||||
WBCnstr00013259 | |||||||
Construct_product | WBCnstr00013259 | ||||||
Microarray_results (37) | |||||||
Expression_cluster (195) | |||||||
Interaction (17) | |||||||
Map_info | Map | X | Position | -5.72774 | Error | 0.007898 | |
Positive | Positive_clone | F32A6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (12) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |