WormBase Tree Display for Gene: WBGene00018266
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| WBGene00018266 | SMap | S_parent | Sequence | F41B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-183 | Person_evidence | WBPerson600 | |||||
| Sequence_name | F41B5.10 | ||||||||
| Molecular_name | F41B5.10 | ||||||||
| F41B5.10.1 | |||||||||
| CE17819 | |||||||||
| Other_name | CELE_F41B5.10 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-183 | ||||||||
| DB_info | Database | AceView | gene | 5C738 | |||||
| WormQTL | gene | WBGene00018266 | |||||||
| WormFlux | gene | WBGene00018266 | |||||||
| NDB | locus_tag | CELE_F41B5.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018266|UniProtKB=O16677 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 185594 | |||||||
| RefSeq | protein | NM_071220.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315604 | |||||||
| TrEMBL | UniProtAcc | O16677 | |||||||
| UniProt_GCRP | UniProtAcc | O16677 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-183 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (111) | |||||||||
| Strain | WBStrain00035316 | ||||||||
| WBStrain00035317 | |||||||||
| WBStrain00035318 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00028474 | ||||||||
| 00028475 | |||||||||
| 00028476 | |||||||||
| 00123450 | |||||||||
| 00123451 | |||||||||
| 00123452 | |||||||||
| 00123453 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in head neurons; tail neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F41B5.10 | |||||||
| Corresponding_transcript | F41B5.10.1 | ||||||||
| Associated_feature | WBsf652504 | ||||||||
| WBsf668796 | |||||||||
| WBsf978500 | |||||||||
| WBsf999485 | |||||||||
| WBsf1019279 | |||||||||
| WBsf233405 | |||||||||
| Transcription_factor | WBTranscriptionFactor001009 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00046942 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014716 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032070 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram46 | ||||||||
| Chronogram60 | |||||||||
| Chronogram89 | |||||||||
| Expr7553 | |||||||||
| Expr1019643 | |||||||||
| Expr1037866 | |||||||||
| Expr1150809 | |||||||||
| Expr2014085 | |||||||||
| Expr2032325 | |||||||||
| Drives_construct | WBCnstr00001126 | ||||||||
| WBCnstr00001127 | |||||||||
| WBCnstr00001128 | |||||||||
| WBCnstr00012698 | |||||||||
| WBCnstr00026655 | |||||||||
| Construct_product | WBCnstr00026655 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (168) | |||||||||
| Interaction | WBInteraction000247141 | ||||||||
| WBInteraction000381630 | |||||||||
| Map_info | Map | V | Position | -15.0859 | Error | 0.017588 | |||
| Positive | Positive_clone | F41B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5365 | |||||||
| 5378 | |||||||||
| 4829 | |||||||||
| 4860 | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
