WormBase Tree Display for Gene: WBGene00018438
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| WBGene00018438 | SMap | S_parent | Sequence | F45C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | btb-6 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F45C12.7 | ||||||||
| Molecular_name | F45C12.7 | ||||||||
| F45C12.7.1 | |||||||||
| CE10448 | |||||||||
| Other_name | CELE_F45C12.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | btb-6 | ||||||||
| DB_info | Database | AceView | gene | 2C5 | |||||
| WormQTL | gene | WBGene00018438 | |||||||
| WormFlux | gene | WBGene00018438 | |||||||
| NDB | locus_tag | CELE_F45C12.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018438|UniProtKB=O16741 | |||||||
| family | PTHR22744 | ||||||||
| NCBI | gene | 173539 | |||||||
| RefSeq | protein | NM_061653.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322195 | |||||||
| TrEMBL | UniProtAcc | O16741 | |||||||
| UniProt_GCRP | UniProtAcc | O16741 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 07 Nov 2007 11:51:23 | WBPerson2970 | Name_change | CGC_name | btb-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | btb | ||||||||
| Allele (40) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (29) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaaaarl; ABalaaaarr; BAG; germ line; and muscle cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including hydrogen sulfide; rotenone; and Alovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F45C12.7 | |||||||
| Corresponding_transcript | F45C12.7.1 | ||||||||
| Associated_feature | WBsf643982 | ||||||||
| WBsf986780 | |||||||||
| WBsf986781 | |||||||||
| WBsf1011611 | |||||||||
| WBsf1011612 | |||||||||
| WBsf220864 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032282 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014989 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047363 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007565 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024354 | ||||||||
| Expr1037946 | |||||||||
| Expr1151215 | |||||||||
| Expr2009674 | |||||||||
| Expr2027913 | |||||||||
| Drives_construct | WBCnstr00026514 | ||||||||
| Construct_product | WBCnstr00026514 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (203) | |||||||||
| Interaction (165) | |||||||||
| Map_info | Map | II | Position | -14.5274 | Error | 0.000519 | |||
| Positive | Positive_clone | F45C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
