WormBase Tree Display for Gene: WBGene00018516
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| WBGene00018516 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gakh-1 | Person_evidence | WBPerson139 | |||||
| Sequence_name | F46G11.3 | ||||||||
| Molecular_name | F46G11.3 | ||||||||
| F46G11.3.1 | |||||||||
| CE04586 | |||||||||
| F46G11.3.2 | |||||||||
| Other_name | tag-257 | ||||||||
| CELE_F46G11.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | gakh-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 31 May 2017 14:23:55 | WBPerson2970 | Name_change | CGC_name | gakh-1 | ||||
| Other_name | tag-257 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gakh | ||||||||
| Allele (72) | |||||||||
| Strain | WBStrain00036085 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00068281 | ||||||||
| 00068282 | |||||||||
| 00068283 | |||||||||
| 00068284 | |||||||||
| 00068285 | |||||||||
| 00068286 | |||||||||
| 00068287 | |||||||||
| 00123629 | |||||||||
| 00123630 | |||||||||
| 00123631 | |||||||||
| Contained_in_operon | CEOPX145 | ||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00004762 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00008424 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable AP-2 adaptor complex binding activity and protein serine/threonine kinase activity. Predicted to be involved in positive regulation of Notch signaling pathway and regulation of clathrin-dependent endocytosis. Predicted to be located in cytoplasm. Expressed in intestine; neurons; and pharynx. Is an ortholog of human GAK (cyclin G associated kinase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F46G11.3 | |||||||
| Corresponding_transcript | F46G11.3.1 | ||||||||
| F46G11.3.2 | |||||||||
| Other_sequence | CJC06090_1 | ||||||||
| CR03900 | |||||||||
| CR12030 | |||||||||
| CRC01431_1 | |||||||||
| CR12031 | |||||||||
| Associated_feature | WBsf1005384 | ||||||||
| WBsf1005385 | |||||||||
| WBsf235751 | |||||||||
| WBsf235752 | |||||||||
| WBsf235753 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr3528 | ||||||||
| Expr3549 | |||||||||
| Expr14463 | |||||||||
| Expr1014629 | |||||||||
| Expr1037979 | |||||||||
| Expr1151413 | |||||||||
| Expr2017249 | |||||||||
| Expr2035385 | |||||||||
| Drives_construct | WBCnstr00011452 | ||||||||
| WBCnstr00026455 | |||||||||
| WBCnstr00040891 | |||||||||
| Construct_product | WBCnstr00011473 | ||||||||
| WBCnstr00026455 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction (68) | |||||||||
| Map_info | Map | X | Position | -4.30807 | Error | 0.010423 | |||
| Positive | Positive_clone | F46G11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5238 | |||||||
| 4396 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027258 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00053550 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062059 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
