WormBase Tree Display for Gene: WBGene00018535
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| WBGene00018535 | SMap | S_parent | Sequence | F47B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F47B7.4 | |||||||
| Molecular_name | F47B7.4 | ||||||||
| F47B7.4.1 | |||||||||
| CE35543 | |||||||||
| Other_name | CELE_F47B7.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F47B7.4 | ||||||||
| DB_info | Database | AceView | gene | XE384 | |||||
| WormQTL | gene | WBGene00018535 | |||||||
| WormFlux | gene | WBGene00018535 | |||||||
| NDB | locus_tag | CELE_F47B7.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018535|UniProtKB=Q20511 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 185891 | |||||||
| RefSeq | protein | NM_076248.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322011 | |||||||
| TrEMBL | UniProtAcc | Q20511 | |||||||
| UniProt_GCRP | UniProtAcc | Q20511 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00040996 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||||
| WBGene00040997 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
| CBOVI.g1498 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CBOVI.g8057 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP38.g7933 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g18814 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (88) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-16; daf-12; and eat-2 based on tiling array; RNA-seq; and microarray studies. Is affected by glycine and nitroguanidine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: TRA-1 regulated and TRA-1 regulated protein R03H10.4. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F47B7.4 | |||||||
| Corresponding_CDS_history | F47B7.4:wp108 | ||||||||
| Corresponding_transcript | F47B7.4.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00044813 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044812 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032414 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015154 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018304 | ||||||||
| Expr1151449 | |||||||||
| Expr2003836 | |||||||||
| Expr2022057 | |||||||||
| Microarray_results | SMD_F47B7.4 | ||||||||
| A_12_P143420 | |||||||||
| Aff_F47B7.4 | |||||||||
| GPL3518_CE02745 | |||||||||
| GPL8304_CE_WBGene00018535_A | |||||||||
| GPL8673_F47B7_4P00088 | |||||||||
| GPL8673_F47B7_4P00606 | |||||||||
| GPL8673_F47B7_4P00613 | |||||||||
| Expression_cluster (66) | |||||||||
| Interaction | WBInteraction000134251 | ||||||||
| WBInteraction000395481 | |||||||||
| WBInteraction000430070 | |||||||||
| Map_info | Positive | Positive_clone | F47B7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -9.45077 | |||||||
| Method | Gene |
