WormBase Tree Display for Gene: WBGene00018587
expand all nodes | collapse all nodes | view schema
| WBGene00018587 | SMap | S_parent | Sequence | F48B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F48B9.1 | |||||||
| Molecular_name | F48B9.1 | ||||||||
| F48B9.1.1 | |||||||||
| CE46654 | |||||||||
| Other_name | F48B9.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F48B9.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | F48B9.1 | ||||||||
| DB_info | Database | AceView | gene | XC801 | |||||
| WormQTL | gene | WBGene00018587 | |||||||
| WormFlux | gene | WBGene00018587 | |||||||
| NDB | locus_tag | CELE_F48B9.1 | |||||||
| NCBI | gene | 185963 | |||||||
| RefSeq | protein | NM_076002.3 | |||||||
| TrEMBL | UniProtAcc | Q20558 | |||||||
| UniProt_GCRP | UniProtAcc | Q20558 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (66) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00034696 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00052086 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00141228 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00135802 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| Cang_2012_03_13_00040.g2191 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold629.g16575 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_00202.g6929 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| FL83_00941 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g18578 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is affected by several genes including skn-1; sek-1; and pgl-1 based on RNA-seq and microarray studies. Is affected by eight chemicals including aldicarb; rotenone; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F48B9.1 | |||||||
| Corresponding_CDS_history | F48B9.1:wp228 | ||||||||
| Corresponding_transcript | F48B9.1.1 | ||||||||
| Associated_feature | WBsf662506 | ||||||||
| WBsf1004248 | |||||||||
| WBsf1004249 | |||||||||
| WBsf1004250 | |||||||||
| WBsf1004251 | |||||||||
| WBsf1004252 | |||||||||
| WBsf1022421 | |||||||||
| WBsf1022422 | |||||||||
| WBsf1022423 | |||||||||
| WBsf235373 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032469 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015230 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047716 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022846 | ||||||||
| Expr1038000 | |||||||||
| Expr1151550 | |||||||||
| Expr2003874 | |||||||||
| Expr2022097 | |||||||||
| Drives_construct | WBCnstr00026401 | ||||||||
| Construct_product | WBCnstr00026401 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (59) | |||||||||
| Map_info | Positive | Positive_clone | F48B9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -16.9037 | |||||||
| Method | Gene |
