WormBase Tree Display for Gene: WBGene00018656
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WBGene00018656 | SMap | S_parent | Sequence | F49H12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | txdc-12.2 | Person_evidence | WBPerson3772 | |||||
WBPerson38007 | |||||||||
Sequence_name | F49H12.5 | ||||||||
Molecular_name | F49H12.5 | ||||||||
F49H12.5.1 | |||||||||
CE20835 | |||||||||
Other_name | CELE_F49H12.5 | Accession_evidence | NDB | BX284606 | |||||
Public_name | txdc-12.2 | ||||||||
DB_info | Database | AceView | gene | XC693 | |||||
WormQTL | gene | WBGene00018656 | |||||||
WormFlux | gene | WBGene00018656 | |||||||
NDB | locus_tag | CELE_F49H12.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018656|UniProtKB=Q9N5S7 | |||||||
family | PTHR15337 | ||||||||
NCBI | gene | 180520 | |||||||
RefSeq | protein | NM_075980.8 | |||||||
TREEFAM | TREEFAM_ID | TF321449 | |||||||
TrEMBL | UniProtAcc | Q9N5S7 | |||||||
UniProt_GCRP | UniProtAcc | Q9N5S7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 01 Aug 2017 12:58:54 | WBPerson2970 | Name_change | CGC_name | txdc-12.2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | txdc | ||||||||
Allele (17) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00095601 | ||||||||
Ortholog (38) | |||||||||
Paralog | WBGene00013263 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable oxidoreductase activity. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in breast cancer; pancreatic ductal adenocarcinoma; and pancreatic ductal carcinoma. Is an ortholog of human TXNDC12 (thioredoxin domain containing 12). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:3587 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:328) | ||||
DOID:3498 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:328) | ||||||
DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:328) | ||||||
Molecular_info | Corresponding_CDS | F49H12.5 | |||||||
Corresponding_transcript | F49H12.5.1 | ||||||||
Other_sequence (42) | |||||||||
Associated_feature | WBsf647839 | ||||||||
WBsf718514 | |||||||||
WBsf1004211 | |||||||||
WBsf1022403 | |||||||||
WBsf235362 | |||||||||
Experimental_info | RNAi_result | WBRNAi00032566 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047889 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00110854 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015347 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1015666 | ||||||||
Expr1038028 | |||||||||
Expr1151720 | |||||||||
Expr2003961 | |||||||||
Expr2022183 | |||||||||
Drives_construct | WBCnstr00026351 | ||||||||
Construct_product | WBCnstr00026351 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (246) | |||||||||
Interaction (17) | |||||||||
Map_info | Positive | Positive_clone | F49H12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | -17.0615 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |