WormBase Tree Display for Gene: WBGene00018781
expand all nodes | collapse all nodes | view schema
WBGene00018781 | SMap | S_parent | Sequence | F54A3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | F54A3.2 | |||||||
Molecular_name | F54A3.2 | ||||||||
F54A3.2.1 | |||||||||
CE44847 | |||||||||
Other_name | F54A3.a | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
F54A3.g | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
F54A3.h | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_F54A3.2 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | F54A3.2 | ||||||||
DB_info | Database | AceView | gene | 2C533 | |||||
WormQTL | gene | WBGene00018781 | |||||||
WormFlux | gene | WBGene00018781 | |||||||
NDB | locus_tag | CELE_F54A3.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018781|UniProtKB=Q9N4J7 | |||||||
family | PTHR12609 | ||||||||
NCBI | gene | 186196 | |||||||
RefSeq | protein | NM_061818.6 | |||||||
TREEFAM | TREEFAM_ID | TF328800 | |||||||
TrEMBL | UniProtAcc | Q9N4J7 | |||||||
UniProt_GCRP | UniProtAcc | Q9N4J7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 28 May 2010 12:03:44 | WBPerson1849 | Event | Acquires_merge | WBGene00018780 | ||||
Acquires_merge | WBGene00018780 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (359) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (19) | |||||||||
Contained_in_operon | CEOP2725 | ||||||||
Ortholog (26) | |||||||||
Paralog | WBGene00006994 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00011613 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable microtubule binding activity and microtubule plus end polymerase. Predicted to be involved in microtubule cytoskeleton organization. Predicted to be located in kinetochore and microtubule cytoskeleton. Is an ortholog of human CKAP5 (cytoskeleton associated protein 5). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F54A3.2 | |||||||
Corresponding_CDS_history | F54A3.2:wp90 | ||||||||
F54A3.2:wp179 | |||||||||
F54A3.2:wp214 | |||||||||
Corresponding_transcript | F54A3.2.1 | ||||||||
Other_sequence | CRC03351_1 | ||||||||
CR04097 | |||||||||
Associated_feature | WBsf986916 | ||||||||
WBsf986917 | |||||||||
WBsf1011696 | |||||||||
WBsf220914 | |||||||||
Experimental_info | RNAi_result | WBRNAi00052870 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015559 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015560 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032729 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048203 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015561 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048204 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019735 | ||||||||
Expr1038095 | |||||||||
Expr1152014 | |||||||||
Expr2004103 | |||||||||
Expr2022328 | |||||||||
Microarray_results (33) | |||||||||
Expression_cluster (82) | |||||||||
Interaction | WBInteraction000553290 | ||||||||
Map_info | Positive | Positive_clone | F54A3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -13.8375 | |||||||
Reference | WBPaper00029395 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |