WormBase Tree Display for Gene: WBGene00019103
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| WBGene00019103 | SMap | S_parent | Sequence | F59D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F59D6.1 | |||||||
| Molecular_name | F59D6.1a | ||||||||
| F59D6.1a.1 | |||||||||
| CE11476 | |||||||||
| F59D6.1c | |||||||||
| CE51061 | |||||||||
| F59D6.1a.2 | |||||||||
| F59D6.1a.3 | |||||||||
| F59D6.1b | |||||||||
| F59D6.1c.1 | |||||||||
| Other_name | CELE_F59D6.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F59D6.1 | ||||||||
| DB_info | Database | AceView | gene | 5D527 | |||||
| WormQTL | gene | WBGene00019103 | |||||||
| WormFlux | gene | WBGene00019103 | |||||||
| NDB | locus_tag | CELE_F59D6.1 | |||||||
| NCBI | gene | 186612 | |||||||
| RefSeq | protein | NR_133616.1 | |||||||
| NM_001316815.3 | |||||||||
| NM_071430.3 | |||||||||
| TrEMBL | UniProtAcc | O16344 | |||||||
| A0A0M7RF68 | |||||||||
| UniProt_GCRP | UniProtAcc | O16344 | |||||||
| RNAcentral | URSid | URS00008DE796 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (124) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00148081 | Caenorhabditis brenneri | From_analysis | OMA | |||||
| WBGene00083720 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Sp34_50031100 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g13628 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00017149 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00018565 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00019732 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00044578 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00019265 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in several structures, including AFD; Caaaaa; Caaaap; Caaapa; and Caaapp based on single-cell RNA-seq; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by eleven chemicals including metformin; Sirolimus; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F59D6.1a | |||||||
| F59D6.1c | |||||||||
| Corresponding_transcript | F59D6.1b | ||||||||
| F59D6.1a.1 | |||||||||
| F59D6.1a.2 | |||||||||
| F59D6.1a.3 | |||||||||
| F59D6.1c.1 | |||||||||
| Other_sequence | SRC08452_1 | ||||||||
| FC810653.1 | |||||||||
| Associated_feature | WBsf999569 | ||||||||
| WBsf231544 | |||||||||
| WBsf231545 | |||||||||
| WBsf231546 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016094 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033193 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049174 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019764 | ||||||||
| Expr1152920 | |||||||||
| Expr2004478 | |||||||||
| Expr2022702 | |||||||||
| Drives_construct | WBCnstr00026063 | ||||||||
| Construct_product | WBCnstr00026063 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction | WBInteraction000392444 | ||||||||
| Map_info | Positive | Positive_clone | F59D6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -12.7955 | |||||||
| Method | Gene |
