WormBase Tree Display for Gene: WBGene00019247
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| WBGene00019247 | SMap | S_parent | Sequence | H27M09 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | syp-4 | Paper_evidence | WBPaper00030765 | |||||
| Person_evidence | WBPerson1547 | ||||||||
| Sequence_name | H27M09.3 | ||||||||
| Molecular_name | H27M09.3 | ||||||||
| H27M09.3.1 | |||||||||
| CE23830 | |||||||||
| Other_name | CELE_H27M09.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | syp-4 | ||||||||
| DB_info | Database | AceView | gene | 1H425 | |||||
| WormQTL | gene | WBGene00019247 | |||||||
| WormFlux | gene | WBGene00019247 | |||||||
| NDB | locus_tag | CELE_H27M09.3 | |||||||
| NCBI | gene | 172411 | |||||||
| RefSeq | protein | NM_059559.5 | |||||||
| SwissProt | UniProtAcc | Q9N5K3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N5K3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Aug 2010 11:56:07 | WBPerson2970 | Name_change | CGC_name | syp-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | syp | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00005203 | ||||||||
| WBStrain00051039 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00095460 | ||||||||
| 00095461 | |||||||||
| 00095462 | |||||||||
| 00095463 | |||||||||
| 00095464 | |||||||||
| 00095465 | |||||||||
| Contained_in_operon | CEOP1902 | ||||||||
| Ortholog (19) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in meiotic cell cycle. Located in central element. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H27M09.3 | |||||||
| Corresponding_transcript | H27M09.3.1 | ||||||||
| Other_sequence | CBC05056_1 | ||||||||
| Associated_feature | WBsf643407 | ||||||||
| WBsf656454 | |||||||||
| WBsf217909 | |||||||||
| WBsf217910 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033761 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00108160 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108161 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108159 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049509 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8806 | ||||||||
| Expr1013460 | |||||||||
| Expr1038314 | |||||||||
| Expr1153230 | |||||||||
| Expr2017187 | |||||||||
| Expr2035323 | |||||||||
| Drives_construct | WBCnstr00025969 | ||||||||
| Construct_product | WBCnstr00025969 | ||||||||
| Antibody | WBAntibody00001990 | ||||||||
| WBAntibody00002753 | |||||||||
| WBAntibody00003038 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction | WBInteraction000554873 | ||||||||
| WBInteraction000556905 | |||||||||
| WBInteraction000556906 | |||||||||
| WBInteraction000567055 | |||||||||
| WBInteraction000567076 | |||||||||
| WBInteraction000567094 | |||||||||
| Map_info | Map | I | Position | 1.38959 | Error | 0.00461 | |||
| Positive | Positive_clone | H27M09 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
