WormBase Tree Display for Gene: WBGene00019249
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| WBGene00019249 | SMap | S_parent | Sequence | H28G03 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hrpa-2 | Person_evidence | WBPerson260 | |||||
| Sequence_name | H28G03.1 | ||||||||
| Molecular_name | H28G03.1a | ||||||||
| H28G03.1a.1 | |||||||||
| CE30079 | |||||||||
| H28G03.1b | |||||||||
| CE30080 | |||||||||
| H28G03.1c | |||||||||
| CE31190 | |||||||||
| H28G03.1b.1 | |||||||||
| H28G03.1c.1 | |||||||||
| Other_name | CELE_H28G03.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | hrpa-2 | ||||||||
| DB_info | Database | AceView | gene | XF837 | |||||
| WormQTL | gene | WBGene00019249 | |||||||
| WormFlux | gene | WBGene00019249 | |||||||
| NDB | locus_tag | CELE_H28G03.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019249|UniProtKB=H2L0D0 | |||||||
| family | PTHR48024 | ||||||||
| NCBI | gene | 180791 | |||||||
| RefSeq | protein | NM_171681.5 | |||||||
| NM_001392774.1 | |||||||||
| NM_171682.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF351860 | |||||||
| TrEMBL | UniProtAcc | Q8MXF3 | |||||||
| H2L0D1 | |||||||||
| H2L0D0 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L0D0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 21 Nov 2019 11:04:57 | WBPerson1983 | Name_change | CGC_name | hrpa-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hrpa | ||||||||
| Allele (59) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00023007 | ||||||||
| 00023008 | |||||||||
| 00023009 | |||||||||
| 00023010 | |||||||||
| 00124151 | |||||||||
| 00124152 | |||||||||
| Contained_in_operon | CEOPX052 | ||||||||
| Ortholog (28) | |||||||||
| Paralog (16) | |||||||||
| Structured_description | Automated_description | Predicted to enable mRNA binding activity. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H28G03.1a | |||||||
| H28G03.1b | |||||||||
| H28G03.1c | |||||||||
| Corresponding_transcript | H28G03.1a.1 | ||||||||
| H28G03.1b.1 | |||||||||
| H28G03.1c.1 | |||||||||
| Other_sequence (28) | |||||||||
| Associated_feature | WBsf648088 | ||||||||
| WBsf662766 | |||||||||
| WBsf1005211 | |||||||||
| WBsf235684 | |||||||||
| WBsf235685 | |||||||||
| WBsf235686 | |||||||||
| WBsf235687 | |||||||||
| WBsf235688 | |||||||||
| WBsf235689 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033763 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016331 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049512 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023429 | ||||||||
| Expr1038316 | |||||||||
| Expr1153233 | |||||||||
| Expr2004587 | |||||||||
| Expr2022812 | |||||||||
| Drives_construct | WBCnstr00025967 | ||||||||
| Construct_product | WBCnstr00025967 | ||||||||
| Microarray_results (42) | |||||||||
| Expression_cluster (183) | |||||||||
| Interaction (34) | |||||||||
| Map_info | Map | X | Position | -6.00162 | |||||
| Positive | Positive_clone | H28G03 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
