WormBase Tree Display for Gene: WBGene00019317
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| WBGene00019317 | SMap | S_parent | Sequence | K02E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rabr-1 | Person_evidence | WBPerson1705 | |||||
| Laboratory_evidence | EB | ||||||||
| Sequence_name | K02E10.1 | ||||||||
| Molecular_name | K02E10.1a | ||||||||
| K02E10.1a.1 | |||||||||
| CE39511 | |||||||||
| K02E10.1b | |||||||||
| CE54565 | |||||||||
| K02E10.1b.1 | |||||||||
| Other_name | K02E10.1 | ||||||||
| CELE_K02E10.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | rabr-1 | ||||||||
| DB_info | Database | AceView | gene | XD119 | |||||
| WormQTL | gene | WBGene00019317 | |||||||
| WormFlux | gene | WBGene00019317 | |||||||
| NDB | locus_tag | CELE_K02E10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019317|UniProtKB=Q21137 | |||||||
| family | PTHR47980 | ||||||||
| NCBI | gene | 180554 | |||||||
| RefSeq | protein | NM_076054.7 | |||||||
| NM_001420570.1 | |||||||||
| TrEMBL | UniProtAcc | A0A9J5DXX5 | |||||||
| Q21137 | |||||||||
| UniProt_GCRP | UniProtAcc | Q21137 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 29 Sep 2022 22:37:18 | WBPerson21950 | Name_change | CGC_name | rabr-1 | ||||
| Other_name | K02E10.1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rabr | ||||||||
| Allele (72) | |||||||||
| Strain | WBStrain00032249 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Automated_description | Predicted to enable GTPase activity. Predicted to be involved in protein localization; regulation of exocytosis; and vesicle-mediated transport. Predicted to be located in cytoplasmic vesicle and plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K02E10.1a | |||||||
| K02E10.1b | |||||||||
| Corresponding_CDS_history | K02E10.1:wp152 | ||||||||
| Corresponding_transcript | K02E10.1a.1 | ||||||||
| K02E10.1b.1 | |||||||||
| Other_sequence (37) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016451 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000248 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049702 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr135 | ||||||||
| Expr1023976 | |||||||||
| Expr1038348 | |||||||||
| Expr1153422 | |||||||||
| Expr2004686 | |||||||||
| Expr2022912 | |||||||||
| Drives_construct | WBCnstr00025922 | ||||||||
| Construct_product | WBCnstr00025922 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction | WBInteraction000400393 | ||||||||
| WBInteraction000408458 | |||||||||
| WBInteraction000419094 | |||||||||
| WBInteraction000421053 | |||||||||
| WBInteraction000422615 | |||||||||
| WBInteraction000451794 | |||||||||
| Map_info | Map | X | Position | -14.8688 | |||||
| Positive | Positive_clone | K02E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
