WormBase Tree Display for Gene: WBGene00019407

WBGene00019407 SMap: S_parent: Sequence: K05F1
  Identity: Version: 3
    Name: CGC_name: lect-2 Person_evidence: WBPerson1705
            WBPerson1781
      Sequence_name: K05F1.5
      Molecular_name: K05F1.5
        K05F1.5.1
        CE51789
      Other_name: CELE_K05F1.5 Accession_evidence: NDB BX284602
      Public_name: lect-2
    DB_info: Database: AceView gene 2G83
        WormQTL gene WBGene00019407
        WormFlux gene WBGene00019407
        NDB locus_tag CELE_K05F1.5
        Panther gene CAEEL|WormBase=WBGene00019407|UniProtKB=Q21241
          family PTHR11329
        NCBI gene 173978
        RefSeq protein NM_062740.8
        SwissProt UniProtAcc Q21241
        TREEFAM TREEFAM_ID TF331097
        UniProt_GCRP UniProtAcc Q21241
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 13 Jul 2016 14:54:16 WBPerson2970 Name_change: CGC_name: lect-2
        3 31 Aug 2016 12:09:51 WBPerson1983 Event: Split_into: WBGene00270309
      Split_into: WBGene00270309
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lect
    Allele (63)
    Strain: WBStrain00032667
      WBStrain00030278
      WBStrain00030280
    RNASeq_FPKM (74)
    GO_annotation (23)
    Ortholog (37)
    Paralog: WBGene00270309 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable metal ion binding activity. Involved in innervation; regulation of dendrite extension; and regulation of dendrite morphogenesis. Located in basement membrane; cell surface; and somatodendritic compartment. Expressed in body wall musculature; coelomocyte; head neurons; and ventral cord neurons. Human ortholog(s) of this gene implicated in hepatocellular carcinoma and lung adenocarcinoma. Is an ortholog of human LECT2 (leukocyte cell derived chemotaxin 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:3910 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6550)
      DOID:684 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6550)
  Molecular_info: Corresponding_CDS: K05F1.5
    Corresponding_CDS_history: K05F1.5:wp255
    Corresponding_transcript: K05F1.5.1
    Other_sequence (49)
    Associated_feature: WBsf657624
      WBsf657625
      WBsf657626
      WBsf987962
      WBsf221342
    Transcription_factor: WBTranscriptionFactor000903
  Experimental_info: RNAi_result: WBRNAi00016629 Inferred_automatically: RNAi_primary
      WBRNAi00076545 Inferred_automatically: RNAi_primary
      WBRNAi00081156 Inferred_automatically: RNAi_primary
      WBRNAi00016630 Inferred_automatically: RNAi_primary
      WBRNAi00049991 Inferred_automatically: RNAi_primary
      WBRNAi00049992 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr13005
      Expr13006
      Expr13152
      Expr13153
      Expr1021828
      Expr1038381
      Expr1153686
      Expr1200321
      Expr2013043
      Expr2031275
    Drives_construct: WBCnstr00025860
      WBCnstr00038191
      WBCnstr00038390
    Construct_product: WBCnstr00021928
      WBCnstr00025860
      WBCnstr00038191
    Microarray_results (24)
    Expression_cluster (153)
    Interaction (11)
  Map_info: Map: II Position: -0.930501
    Positive: Positive_clone: K05F1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (11)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene