WormBase Tree Display for Gene: WBGene00019415
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| WBGene00019415 | SMap | S_parent | Sequence | K05F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | K05F6.4 | |||||||
| Molecular_name | K05F6.4 | ||||||||
| K05F6.4.1 | |||||||||
| CE41428 | |||||||||
| Other_name | CELE_K05F6.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | K05F6.4 | ||||||||
| DB_info | Database | AceView | gene | 2B837 | |||||
| WormQTL | gene | WBGene00019415 | |||||||
| WormFlux | gene | WBGene00019415 | |||||||
| NDB | locus_tag | CELE_K05F6.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019415|UniProtKB=A7DT43 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 187034 | |||||||
| RefSeq | protein | NM_061591.5 | |||||||
| TREEFAM | TREEFAM_ID | TF319367 | |||||||
| TrEMBL | UniProtAcc | A7DT43 | |||||||
| UniProt_GCRP | UniProtAcc | A7DT43 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Jul 2007 10:25:53 | WBPerson1867 | Event | Split_into | WBGene00045486 | ||||
| Split_into | WBGene00045486 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (112) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Paralog (143) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in ABalaapppa; ABalapaapa; ADE sheath cell; and cholinergic neurons based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and eat-2 based on proteomic; microarray; and RNA-seq studies. Is affected by fifteen chemicals including Mercuric Chloride; rotenone; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K05F6.4 | |||||||
| Corresponding_CDS_history | K05F6.4:wp179 | ||||||||
| Corresponding_transcript | K05F6.4.1 | ||||||||
| Associated_feature | WBsf657344 | ||||||||
| WBsf220852 | |||||||||
| WBsf220853 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00115897 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016639 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050002 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1038386 | ||||||||
| Expr1153698 | |||||||||
| Expr2004800 | |||||||||
| Expr2023023 | |||||||||
| Drives_construct | WBCnstr00025855 | ||||||||
| Construct_product | WBCnstr00025855 | ||||||||
| Microarray_results | SMD_K05F6.4 | ||||||||
| A_12_P155385 | |||||||||
| GPL19516_CGZ0027950 | |||||||||
| GPL21109_K05F6.4 | |||||||||
| GPL8673_K05F6_4P00739 | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction (163) | |||||||||
| Map_info | Positive | Positive_clone | K05F6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -15.398 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
